Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU389535 |
| length | 246 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G328798 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 7903642 ~ 7903887 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004576979.1 | lncRNA | downstream | 104257 | 7780040 ~ 7799385 (-) | False | LOC113533080 |
| XR_003403393.2 | lncRNA | downstream | 104257 | 7797200 ~ 7799385 (-) | True | LOC113533080 |
| TU389256 | lncRNA | downstream | 338450 | 7561326 ~ 7565192 (-) | True | G328586 |
| TU389259 | lncRNA | downstream | 344679 | 7558684 ~ 7558963 (-) | True | G328589 |
| TU389258 | lncRNA | downstream | 344993 | 7558395 ~ 7558649 (-) | True | G328588 |
| TU389620 | lncRNA | upstream | 141096 | 8044983 ~ 8045597 (-) | True | G328864 |
| TU389677 | lncRNA | upstream | 229796 | 8133683 ~ 8133887 (-) | True | G328908 |
| TU389718 | lncRNA | upstream | 308869 | 8212756 ~ 8215254 (-) | True | G328942 |
| TU389830 | lncRNA | upstream | 429944 | 8333831 ~ 8334176 (-) | True | G329039 |
| TU389840 | lncRNA | upstream | 447345 | 8351232 ~ 8351641 (-) | True | G329049 |
| XM_026924133.2 | mRNA | downstream | 18929 | 7836660 ~ 7884713 (-) | False | megf8 |
| XM_026924131.2 | mRNA | downstream | 18929 | 7836660 ~ 7884713 (-) | False | megf8 |
| XM_026924130.2 | mRNA | downstream | 18929 | 7836660 ~ 7884713 (-) | False | megf8 |
| XM_034297998.1 | mRNA | downstream | 18929 | 7836660 ~ 7884713 (-) | False | megf8 |
| XM_034297996.1 | mRNA | downstream | 18929 | 7836660 ~ 7884713 (-) | False | megf8 |
| XM_026924151.2 | mRNA | upstream | 23844 | 7927731 ~ 7931036 (-) | True | LOC113532661 |
| XM_034298243.1 | mRNA | upstream | 31576 | 7935463 ~ 7950730 (-) | False | l3mbtl1b |
| XM_026924835.2 | mRNA | upstream | 31576 | 7935463 ~ 7950727 (-) | False | l3mbtl1b |
| XM_034298242.1 | mRNA | upstream | 31576 | 7935463 ~ 7950726 (-) | False | l3mbtl1b |
| XM_026924836.2 | mRNA | upstream | 31576 | 7935463 ~ 7950019 (-) | False | l3mbtl1b |
| TU389089 | other | downstream | 517336 | 7378780 ~ 7386306 (-) | False | sec61b |
| TU388974 | other | downstream | 841214 | 7056794 ~ 7062428 (-) | True | G328342 |
| trnam-cau_47 | other | downstream | 1473710 | 6429860 ~ 6429932 (-) | True | trnam-cau_47 |
| XR_003403372.2 | other | downstream | 1925263 | 5829474 ~ 5978379 (-) | False | zfpm2a |
| XR_003404173.1 | other | upstream | 2380947 | 10284834 ~ 10284937 (-) | True | LOC113541360 |
| TU391129 | other | upstream | 2618845 | 10522732 ~ 10523263 (-) | True | G330185 |
| XR_003404157.2 | other | upstream | 3019239 | 10923126 ~ 10930775 (-) | False | ackr4b |
| TU391338 | other | upstream | 3178381 | 11082268 ~ 11083151 (-) | True | G330379 |
| TU392350 | other | upstream | 4772694 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
