Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU389620 |
| length | 615 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G328864 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 8044983 ~ 8045597 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU389535 | lncRNA | downstream | 141096 | 7903642 ~ 7903887 (-) | True | G328798 |
| XR_004576979.1 | lncRNA | downstream | 245598 | 7780040 ~ 7799385 (-) | False | LOC113533080 |
| XR_003403393.2 | lncRNA | downstream | 245598 | 7797200 ~ 7799385 (-) | True | LOC113533080 |
| TU389256 | lncRNA | downstream | 479791 | 7561326 ~ 7565192 (-) | True | G328586 |
| TU389259 | lncRNA | downstream | 486020 | 7558684 ~ 7558963 (-) | True | G328589 |
| TU389677 | lncRNA | upstream | 88086 | 8133683 ~ 8133887 (-) | True | G328908 |
| TU389718 | lncRNA | upstream | 167159 | 8212756 ~ 8215254 (-) | True | G328942 |
| TU389830 | lncRNA | upstream | 288234 | 8333831 ~ 8334176 (-) | True | G329039 |
| TU389840 | lncRNA | upstream | 305635 | 8351232 ~ 8351641 (-) | True | G329049 |
| XR_004576942.1 | lncRNA | upstream | 527547 | 8573144 ~ 8576124 (-) | True | LOC117595772 |
| XM_026924583.2 | mRNA | downstream | 85199 | 7955305 ~ 7959784 (-) | False | sgk2b |
| XM_026924582.2 | mRNA | downstream | 85199 | 7955305 ~ 7959784 (-) | False | sgk2b |
| XM_026924581.2 | mRNA | downstream | 85199 | 7955305 ~ 7959784 (-) | True | sgk2b |
| XM_034298243.1 | mRNA | downstream | 94253 | 7935463 ~ 7950730 (-) | False | l3mbtl1b |
| XM_026924835.2 | mRNA | downstream | 94256 | 7935463 ~ 7950727 (-) | False | l3mbtl1b |
| XM_026924723.2 | mRNA | upstream | 1785 | 8047382 ~ 8065243 (-) | False | esrp1 |
| XM_026924724.2 | mRNA | upstream | 1785 | 8047382 ~ 8065243 (-) | False | esrp1 |
| XM_026924722.2 | mRNA | upstream | 1785 | 8047382 ~ 8065243 (-) | True | esrp1 |
| XM_026924324.2 | mRNA | upstream | 49986 | 8095583 ~ 8106001 (-) | True | rnf41l |
| XM_026924326.2 | mRNA | upstream | 49986 | 8095583 ~ 8105889 (-) | False | rnf41l |
| TU389089 | other | downstream | 658677 | 7378780 ~ 7386306 (-) | False | sec61b |
| TU388974 | other | downstream | 982555 | 7056794 ~ 7062428 (-) | True | G328342 |
| trnam-cau_47 | other | downstream | 1615051 | 6429860 ~ 6429932 (-) | True | trnam-cau_47 |
| XR_003403372.2 | other | downstream | 2066604 | 5829474 ~ 5978379 (-) | False | zfpm2a |
| XR_003404173.1 | other | upstream | 2239237 | 10284834 ~ 10284937 (-) | True | LOC113541360 |
| TU391129 | other | upstream | 2477135 | 10522732 ~ 10523263 (-) | True | G330185 |
| XR_003404157.2 | other | upstream | 2877529 | 10923126 ~ 10930775 (-) | False | ackr4b |
| TU391338 | other | upstream | 3036671 | 11082268 ~ 11083151 (-) | True | G330379 |
| TU392350 | other | upstream | 4630984 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
