Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU389677 |
| length | 205 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G328908 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 8133683 ~ 8133887 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU389620 | lncRNA | downstream | 88086 | 8044983 ~ 8045597 (-) | True | G328864 |
| TU389535 | lncRNA | downstream | 229796 | 7903642 ~ 7903887 (-) | True | G328798 |
| XR_004576979.1 | lncRNA | downstream | 334298 | 7780040 ~ 7799385 (-) | False | LOC113533080 |
| XR_003403393.2 | lncRNA | downstream | 334298 | 7797200 ~ 7799385 (-) | True | LOC113533080 |
| TU389256 | lncRNA | downstream | 568491 | 7561326 ~ 7565192 (-) | True | G328586 |
| TU389718 | lncRNA | upstream | 78869 | 8212756 ~ 8215254 (-) | True | G328942 |
| TU389830 | lncRNA | upstream | 199944 | 8333831 ~ 8334176 (-) | True | G329039 |
| TU389840 | lncRNA | upstream | 217345 | 8351232 ~ 8351641 (-) | True | G329049 |
| XR_004576942.1 | lncRNA | upstream | 439257 | 8573144 ~ 8576124 (-) | True | LOC117595772 |
| TU390020 | lncRNA | upstream | 485340 | 8619227 ~ 8626449 (-) | True | G329211 |
| XM_026924324.2 | mRNA | downstream | 27682 | 8095583 ~ 8106001 (-) | True | rnf41l |
| XM_026924326.2 | mRNA | downstream | 27794 | 8095583 ~ 8105889 (-) | False | rnf41l |
| XM_026924723.2 | mRNA | downstream | 68440 | 8047382 ~ 8065243 (-) | False | esrp1 |
| XM_026924724.2 | mRNA | downstream | 68440 | 8047382 ~ 8065243 (-) | False | esrp1 |
| XM_026924722.2 | mRNA | downstream | 68440 | 8047382 ~ 8065243 (-) | True | esrp1 |
| XM_026924822.2 | mRNA | upstream | 24485 | 8158372 ~ 8164264 (-) | False | pdp1 |
| XM_034297941.1 | mRNA | upstream | 24485 | 8158372 ~ 8164207 (-) | False | pdp1 |
| XM_034297942.1 | mRNA | upstream | 24485 | 8158372 ~ 8164113 (-) | False | pdp1 |
| XM_026924823.2 | mRNA | upstream | 24485 | 8158372 ~ 8163976 (-) | True | pdp1 |
| XM_026924028.2 | mRNA | upstream | 33171 | 8167058 ~ 8180398 (-) | False | hus1 |
| TU389089 | other | downstream | 747377 | 7378780 ~ 7386306 (-) | False | sec61b |
| TU388974 | other | downstream | 1071255 | 7056794 ~ 7062428 (-) | True | G328342 |
| trnam-cau_47 | other | downstream | 1703751 | 6429860 ~ 6429932 (-) | True | trnam-cau_47 |
| XR_003403372.2 | other | downstream | 2155304 | 5829474 ~ 5978379 (-) | False | zfpm2a |
| XR_003404173.1 | other | upstream | 2150947 | 10284834 ~ 10284937 (-) | True | LOC113541360 |
| TU391129 | other | upstream | 2388845 | 10522732 ~ 10523263 (-) | True | G330185 |
| XR_003404157.2 | other | upstream | 2789239 | 10923126 ~ 10930775 (-) | False | ackr4b |
| TU391338 | other | upstream | 2948381 | 11082268 ~ 11083151 (-) | True | G330379 |
| TU392350 | other | upstream | 4542694 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
