Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU390255 |
| length | 916 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G329404 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 8847485 ~ 8851312 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004576950.1 | lncRNA | downstream | 8491 | 8823190 ~ 8838994 (-) | True | LOC117595776 |
| TU390107 | lncRNA | downstream | 96441 | 8750842 ~ 8751044 (-) | True | G329290 |
| TU390020 | lncRNA | downstream | 221036 | 8619227 ~ 8626449 (-) | True | G329211 |
| XR_004576942.1 | lncRNA | downstream | 271361 | 8573144 ~ 8576124 (-) | True | LOC117595772 |
| TU389840 | lncRNA | downstream | 495844 | 8351232 ~ 8351641 (-) | True | G329049 |
| TU390289 | lncRNA | upstream | 68968 | 8920280 ~ 8921013 (-) | True | G329438 |
| TU390299 | lncRNA | upstream | 90825 | 8942137 ~ 8942358 (-) | True | G329447 |
| TU390329 | lncRNA | upstream | 159149 | 9010461 ~ 9010665 (-) | True | G329461 |
| XR_004576976.1 | lncRNA | upstream | 197928 | 9049240 ~ 9050902 (-) | True | LOC117595798 |
| XR_004576977.1 | lncRNA | upstream | 205903 | 9057215 ~ 9081783 (-) | True | LOC117595799 |
| XM_026924128.2 | mRNA | downstream | 10654 | 8830847 ~ 8836831 (-) | True | si:dkey-197c15.6 |
| XM_026924162.2 | mRNA | downstream | 181630 | 8652432 ~ 8665855 (-) | True | cavin1b |
| XM_026924820.2 | mRNA | downstream | 200976 | 8589264 ~ 8646509 (-) | True | rpgrip1 |
| XM_026924035.2 | mRNA | downstream | 525325 | 8308408 ~ 8322160 (-) | True | LOC113532599 |
| XM_034298134.1 | mRNA | upstream | 93073 | 8944385 ~ 8955194 (-) | True | txndc5 |
| XM_026923926.2 | mRNA | upstream | 111460 | 8962772 ~ 8967175 (-) | True | bloc1s5 |
| XM_026923927.2 | mRNA | upstream | 113105 | 8964417 ~ 8967175 (-) | False | bloc1s5 |
| XM_034298003.1 | mRNA | upstream | 600062 | 9451374 ~ 9472412 (-) | True | mak |
| XM_034298004.1 | mRNA | upstream | 600062 | 9451374 ~ 9472391 (-) | False | mak |
| TU389089 | other | downstream | 1461179 | 7378780 ~ 7386306 (-) | False | sec61b |
| TU388974 | other | downstream | 1785057 | 7056794 ~ 7062428 (-) | True | G328342 |
| trnam-cau_47 | other | downstream | 2417553 | 6429860 ~ 6429932 (-) | True | trnam-cau_47 |
| XR_003403372.2 | other | downstream | 2869106 | 5829474 ~ 5978379 (-) | False | zfpm2a |
| XR_003404173.1 | other | upstream | 1433522 | 10284834 ~ 10284937 (-) | True | LOC113541360 |
| TU391129 | other | upstream | 1671420 | 10522732 ~ 10523263 (-) | True | G330185 |
| XR_003404157.2 | other | upstream | 2071814 | 10923126 ~ 10930775 (-) | False | ackr4b |
| TU391338 | other | upstream | 2230956 | 11082268 ~ 11083151 (-) | True | G330379 |
| TU392350 | other | upstream | 3825269 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
