Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU390570 |
| length | 312 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 1 |
| gene id | G329686 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 9575384 ~ 9575695 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU390402 | lncRNA | downstream | 225547 | 9349466 ~ 9349837 (-) | True | G329531 |
| XR_004576977.1 | lncRNA | downstream | 493601 | 9057215 ~ 9081783 (-) | True | LOC117595799 |
| XR_004576976.1 | lncRNA | downstream | 524482 | 9049240 ~ 9050902 (-) | True | LOC117595798 |
| TU390329 | lncRNA | downstream | 564719 | 9010461 ~ 9010665 (-) | True | G329461 |
| TU390299 | lncRNA | downstream | 633026 | 8942137 ~ 8942358 (-) | True | G329447 |
| TU390617 | lncRNA | upstream | 46016 | 9621711 ~ 9622672 (-) | True | G329722 |
| TU390658 | lncRNA | upstream | 142467 | 9718162 ~ 9719292 (-) | True | G329756 |
| TU390656 | lncRNA | upstream | 143970 | 9719665 ~ 9723670 (-) | True | G329755 |
| TU390657 | lncRNA | upstream | 143970 | 9719665 ~ 9723670 (-) | False | G329755 |
| TU390664 | lncRNA | upstream | 153173 | 9728868 ~ 9731870 (-) | True | G329761 |
| XM_026923982.2 | mRNA | downstream | 3179 | 9552595 ~ 9572205 (-) | True | elovl2 |
| XM_034298196.1 | mRNA | downstream | 65195 | 9504137 ~ 9510189 (-) | True | gcm2 |
| XM_034298003.1 | mRNA | downstream | 102972 | 9451374 ~ 9472412 (-) | True | mak |
| XM_026923977.2 | mRNA | downstream | 102972 | 9451375 ~ 9472412 (-) | False | mak |
| XM_026923978.2 | mRNA | downstream | 102972 | 9451377 ~ 9472412 (-) | False | mak |
| XM_026924858.2 | mRNA | upstream | 111860 | 9687555 ~ 9717566 (-) | False | mppe1 |
| XM_026924857.2 | mRNA | upstream | 111860 | 9687555 ~ 9717564 (-) | True | mppe1 |
| XM_034297837.1 | mRNA | upstream | 220639 | 9796334 ~ 9819533 (-) | True | LOC113532851 |
| XM_034297838.1 | mRNA | upstream | 575802 | 10151497 ~ 10156800 (-) | True | LOC113541109 |
| XM_026938042.2 | mRNA | upstream | 1349852 | 10925547 ~ 10930775 (-) | True | ackr4b |
| TU389089 | other | downstream | 2189078 | 7378780 ~ 7386306 (-) | False | sec61b |
| TU388974 | other | downstream | 2512956 | 7056794 ~ 7062428 (-) | True | G328342 |
| trnam-cau_47 | other | downstream | 3145452 | 6429860 ~ 6429932 (-) | True | trnam-cau_47 |
| XR_003403372.2 | other | downstream | 3597005 | 5829474 ~ 5978379 (-) | False | zfpm2a |
| XR_003404173.1 | other | upstream | 709139 | 10284834 ~ 10284937 (-) | True | LOC113541360 |
| TU391129 | other | upstream | 947037 | 10522732 ~ 10523263 (-) | True | G330185 |
| XR_003404157.2 | other | upstream | 1347431 | 10923126 ~ 10930775 (-) | False | ackr4b |
| TU391338 | other | upstream | 1506573 | 11082268 ~ 11083151 (-) | True | G330379 |
| TU392350 | other | upstream | 3100886 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
