Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034297838.1 |
| length | 1074 |
| RNA type | mRNA |
| GC content | 0.53 |
| exon number | 5 |
| gene id | LOC113541109 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 10151497 ~ 10156800 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU390851 | lncRNA | downstream | 12540 | 10138703 ~ 10138957 (-) | True | G329934 |
| XR_004576963.1 | lncRNA | downstream | 237924 | 9912522 ~ 9913573 (-) | True | LOC117595785 |
| TU390717 | lncRNA | downstream | 303933 | 9847017 ~ 9847564 (-) | True | G329810 |
| TU390685 | lncRNA | downstream | 360613 | 9790661 ~ 9790884 (-) | True | G329778 |
| TU390677 | lncRNA | downstream | 382922 | 9766077 ~ 9768575 (-) | True | G329771 |
| TU390860 | lncRNA | upstream | 2967 | 10159767 ~ 10159983 (-) | True | G329943 |
| TU390869 | lncRNA | upstream | 9275 | 10166075 ~ 10166604 (-) | True | G329952 |
| TU390904 | lncRNA | upstream | 22408 | 10179208 ~ 10180313 (-) | False | LOC113541201 |
| XR_003404158.2 | lncRNA | upstream | 22775 | 10179575 ~ 10182831 (-) | True | LOC113541201 |
| TU390916 | lncRNA | upstream | 51781 | 10208581 ~ 10213864 (-) | True | G329996 |
| XM_034297837.1 | mRNA | downstream | 331964 | 9796334 ~ 9819533 (-) | True | LOC113532851 |
| XM_026924858.2 | mRNA | downstream | 433931 | 9687555 ~ 9717566 (-) | False | mppe1 |
| XM_026924857.2 | mRNA | downstream | 433933 | 9687555 ~ 9717564 (-) | True | mppe1 |
| XM_026923982.2 | mRNA | downstream | 579292 | 9552595 ~ 9572205 (-) | True | elovl2 |
| XM_034298196.1 | mRNA | downstream | 641308 | 9504137 ~ 9510189 (-) | True | gcm2 |
| XM_026938042.2 | mRNA | upstream | 768747 | 10925547 ~ 10930775 (-) | True | ackr4b |
| XM_034298149.1 | mRNA | upstream | 818974 | 10975774 ~ 10980139 (-) | True | si:dkey-12l12.1 |
| XM_034298200.1 | mRNA | upstream | 949614 | 11106414 ~ 11109555 (-) | True | LOC113541107 |
| XM_026938249.2 | mRNA | upstream | 1151954 | 11308754 ~ 11310736 (-) | False | prlh2 |
| XM_034298214.1 | mRNA | upstream | 1151954 | 11308754 ~ 11310736 (-) | True | prlh2 |
| TU389089 | other | downstream | 2765191 | 7378780 ~ 7386306 (-) | False | sec61b |
| TU388974 | other | downstream | 3089069 | 7056794 ~ 7062428 (-) | True | G328342 |
| trnam-cau_47 | other | downstream | 3721565 | 6429860 ~ 6429932 (-) | True | trnam-cau_47 |
| XR_003403372.2 | other | downstream | 4173118 | 5829474 ~ 5978379 (-) | False | zfpm2a |
| XR_003404173.1 | other | upstream | 128034 | 10284834 ~ 10284937 (-) | True | LOC113541360 |
| TU391129 | other | upstream | 365932 | 10522732 ~ 10523263 (-) | True | G330185 |
| XR_003404157.2 | other | upstream | 766326 | 10923126 ~ 10930775 (-) | False | ackr4b |
| TU391338 | other | upstream | 925468 | 11082268 ~ 11083151 (-) | True | G330379 |
| TU392350 | other | upstream | 2519781 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
