Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU390975 |
| length | 206 |
| lncRNA type | read_through |
| GC content | 0.50 |
| exon number | 2 |
| gene id | G330043 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 10412777 ~ 10445475 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU390972 | lncRNA | upstream | 38720 | 10362531 ~ 10374057 (+) | True | G330040 |
| TU390893 | lncRNA | upstream | 132810 | 10213263 ~ 10279967 (+) | True | G329976 |
| TU390892 | lncRNA | upstream | 200347 | 10209923 ~ 10212430 (+) | True | G329975 |
| TU390881 | lncRNA | upstream | 225840 | 10174629 ~ 10186937 (+) | True | G329964 |
| TU390866 | lncRNA | upstream | 248657 | 10163919 ~ 10164120 (+) | True | G329949 |
| TU390982 | lncRNA | downstream | 7508 | 10452983 ~ 10454904 (+) | True | G330049 |
| TU390985 | lncRNA | downstream | 37854 | 10483329 ~ 10483668 (+) | True | G330052 |
| TU390989 | lncRNA | downstream | 74416 | 10519891 ~ 10520607 (+) | True | G330056 |
| TU390992 | lncRNA | downstream | 87996 | 10533471 ~ 10533787 (+) | True | G330059 |
| TU390996 | lncRNA | downstream | 129414 | 10574889 ~ 10575096 (+) | True | G330063 |
| XM_026938243.2 | mRNA | upstream | 25779 | 10345323 ~ 10386998 (+) | False | tmx3b |
| XM_026938046.2 | mRNA | upstream | 70876 | 10182792 ~ 10341901 (+) | True | LOC113541200 |
| XM_026938043.2 | mRNA | upstream | 70876 | 10182793 ~ 10341901 (+) | False | LOC113541200 |
| XM_026938045.2 | mRNA | upstream | 71824 | 10182791 ~ 10340953 (+) | False | LOC113541200 |
| XM_026937829.2 | mRNA | downstream | 103253 | 10548728 ~ 10552018 (+) | True | ccr9b |
| XM_034297936.1 | mRNA | downstream | 149655 | 10595130 ~ 10768360 (+) | False | gli3 |
| XM_026937846.2 | mRNA | downstream | 149655 | 10595130 ~ 10768360 (+) | False | gli3 |
| XM_034297935.1 | mRNA | downstream | 149656 | 10595131 ~ 10768360 (+) | True | gli3 |
| XM_026937843.2 | mRNA | downstream | 149656 | 10595131 ~ 10768360 (+) | False | gli3 |
| TU390686 | other | upstream | 620044 | 9791684 ~ 9792733 (+) | True | G329779 |
| TU390118 | other | upstream | 1556501 | 8853328 ~ 8856276 (+) | False | bmp6 |
| XR_004576948.1 | other | upstream | 1593510 | 8768746 ~ 8819267 (+) | False | LOC113532648 |
| XR_004576949.1 | other | upstream | 1597217 | 8768745 ~ 8815560 (+) | False | LOC113532648 |
| TU389909 | other | upstream | 1746941 | 8615073 ~ 8665836 (+) | False | G329111 |
| TU390999 | other | downstream | 149727 | 10595202 ~ 10678375 (+) | False | gli3 |
| XR_004576967.1 | other | downstream | 428734 | 10874209 ~ 10984209 (+) | True | acad11 |
| XR_003404155.2 | other | downstream | 428734 | 10874209 ~ 10984209 (+) | False | acad11 |
| XR_004576968.1 | other | downstream | 428734 | 10874209 ~ 10983215 (+) | False | acad11 |
| XR_004576969.1 | other | downstream | 428734 | 10874209 ~ 10983215 (+) | False | acad11 |
