Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU390989 |
| length | 717 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G330056 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 10519891 ~ 10520607 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU390985 | lncRNA | upstream | 36223 | 10483329 ~ 10483668 (+) | True | G330052 |
| TU390976 | lncRNA | upstream | 58161 | 10413181 ~ 10461730 (+) | True | G330044 |
| TU390982 | lncRNA | upstream | 64987 | 10452983 ~ 10454904 (+) | True | G330049 |
| TU390975 | lncRNA | upstream | 74416 | 10412777 ~ 10445475 (+) | True | G330043 |
| TU390972 | lncRNA | upstream | 145834 | 10362531 ~ 10374057 (+) | True | G330040 |
| TU390992 | lncRNA | downstream | 12864 | 10533471 ~ 10533787 (+) | True | G330059 |
| TU390996 | lncRNA | downstream | 54282 | 10574889 ~ 10575096 (+) | True | G330063 |
| TU391001 | lncRNA | downstream | 74595 | 10595202 ~ 10627892 (+) | False | gli3 |
| TU391057 | lncRNA | downstream | 224628 | 10745235 ~ 10745444 (+) | True | G330121 |
| TU391058 | lncRNA | downstream | 229146 | 10749753 ~ 10750039 (+) | True | G330122 |
| XM_026938037.2 | mRNA | upstream | 42349 | 10440957 ~ 10477542 (+) | False | lztfl1 |
| XM_026938034.2 | mRNA | upstream | 42349 | 10440961 ~ 10477542 (+) | True | lztfl1 |
| XM_026938035.2 | mRNA | upstream | 42349 | 10440961 ~ 10477542 (+) | False | lztfl1 |
| XM_026938036.2 | mRNA | upstream | 42349 | 10441309 ~ 10477542 (+) | False | lztfl1 |
| XM_026938242.2 | mRNA | upstream | 93455 | 10345324 ~ 10426436 (+) | False | tmx3b |
| XM_026937829.2 | mRNA | downstream | 28121 | 10548728 ~ 10552018 (+) | True | ccr9b |
| XM_034297936.1 | mRNA | downstream | 74523 | 10595130 ~ 10768360 (+) | False | gli3 |
| XM_026937846.2 | mRNA | downstream | 74523 | 10595130 ~ 10768360 (+) | False | gli3 |
| XM_034297935.1 | mRNA | downstream | 74524 | 10595131 ~ 10768360 (+) | True | gli3 |
| XM_026937843.2 | mRNA | downstream | 74524 | 10595131 ~ 10768360 (+) | False | gli3 |
| TU390970 | other | upstream | 87027 | 10431333 ~ 10432864 (+) | True | G330038 |
| TU390686 | other | upstream | 727158 | 9791684 ~ 9792733 (+) | True | G329779 |
| TU390118 | other | upstream | 1663615 | 8853328 ~ 8856276 (+) | False | bmp6 |
| XR_004576948.1 | other | upstream | 1700624 | 8768746 ~ 8819267 (+) | False | LOC113532648 |
| XR_004576949.1 | other | upstream | 1704331 | 8768745 ~ 8815560 (+) | False | LOC113532648 |
| TU390999 | other | downstream | 74595 | 10595202 ~ 10678375 (+) | False | gli3 |
| XR_004576967.1 | other | downstream | 353602 | 10874209 ~ 10984209 (+) | True | acad11 |
| XR_003404155.2 | other | downstream | 353602 | 10874209 ~ 10984209 (+) | False | acad11 |
| XR_004576968.1 | other | downstream | 353602 | 10874209 ~ 10983215 (+) | False | acad11 |
| XR_004576969.1 | other | downstream | 353602 | 10874209 ~ 10983215 (+) | False | acad11 |
