Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU390999 |
| length | 993 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 4 |
| gene id | gli3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 10595130 ~ 10768360 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU390996 | lncRNA | upstream | 20106 | 10574889 ~ 10575096 (+) | True | G330063 |
| TU390992 | lncRNA | upstream | 61415 | 10533471 ~ 10533787 (+) | True | G330059 |
| TU390989 | lncRNA | upstream | 74595 | 10519891 ~ 10520607 (+) | True | G330056 |
| TU390985 | lncRNA | upstream | 111534 | 10483329 ~ 10483668 (+) | True | G330052 |
| TU390976 | lncRNA | upstream | 133472 | 10413181 ~ 10461730 (+) | True | G330044 |
| TU391057 | lncRNA | downstream | 66860 | 10745235 ~ 10745444 (+) | True | G330121 |
| TU391058 | lncRNA | downstream | 71378 | 10749753 ~ 10750039 (+) | True | G330122 |
| TU391208 | lncRNA | downstream | 292820 | 10971195 ~ 10971618 (+) | True | G330259 |
| TU391210 | lncRNA | downstream | 308333 | 10986708 ~ 10988052 (+) | True | G330260 |
| TU391307 | lncRNA | downstream | 315449 | 10993824 ~ 10994253 (+) | True | G330350 |
| XM_026937829.2 | mRNA | upstream | 43184 | 10548728 ~ 10552018 (+) | True | ccr9b |
| XM_026938037.2 | mRNA | upstream | 117660 | 10440957 ~ 10477542 (+) | False | lztfl1 |
| XM_026938034.2 | mRNA | upstream | 117660 | 10440961 ~ 10477542 (+) | True | lztfl1 |
| XM_026938035.2 | mRNA | upstream | 117660 | 10440961 ~ 10477542 (+) | False | lztfl1 |
| XM_026938036.2 | mRNA | upstream | 117660 | 10441309 ~ 10477542 (+) | False | lztfl1 |
| XM_026938025.2 | mRNA | downstream | 132231 | 10810606 ~ 10828391 (+) | True | prpf4bb |
| XM_026938026.2 | mRNA | downstream | 163308 | 10841683 ~ 10860448 (+) | True | pxdc1b |
| XM_026938041.2 | mRNA | downstream | 195834 | 10874209 ~ 10983215 (+) | False | acad11 |
| XM_034298145.1 | mRNA | downstream | 195834 | 10874209 ~ 10983215 (+) | False | acad11 |
| XM_034298146.1 | mRNA | downstream | 195834 | 10874209 ~ 10983215 (+) | False | acad11 |
| TU390970 | other | upstream | 162338 | 10431333 ~ 10432864 (+) | True | G330038 |
| TU390686 | other | upstream | 802469 | 9791684 ~ 9792733 (+) | True | G329779 |
| TU390118 | other | upstream | 1738926 | 8853328 ~ 8856276 (+) | False | bmp6 |
| XR_004576948.1 | other | upstream | 1775935 | 8768746 ~ 8819267 (+) | False | LOC113532648 |
| XR_004576949.1 | other | upstream | 1779642 | 8768745 ~ 8815560 (+) | False | LOC113532648 |
| XR_004576967.1 | other | downstream | 195834 | 10874209 ~ 10984209 (+) | True | acad11 |
| XR_003404155.2 | other | downstream | 195834 | 10874209 ~ 10984209 (+) | False | acad11 |
| XR_004576968.1 | other | downstream | 195834 | 10874209 ~ 10983215 (+) | False | acad11 |
| XR_004576969.1 | other | downstream | 195834 | 10874209 ~ 10983215 (+) | False | acad11 |
| TU391206 | other | downstream | 294889 | 10973264 ~ 10974915 (+) | True | G330257 |
