Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU391882 |
| length | 252 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 1 |
| gene id | G330856 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 11826139 ~ 11826390 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU391617 | lncRNA | upstream | 442477 | 11383436 ~ 11383662 (+) | True | G330616 |
| TU391437 | lncRNA | upstream | 471138 | 11354620 ~ 11355001 (+) | True | G330457 |
| TU391431 | lncRNA | upstream | 471138 | 11354686 ~ 11355001 (+) | False | G330457 |
| XR_003404149.2 | lncRNA | upstream | 824301 | 10998040 ~ 11001838 (+) | False | LOC113541116 |
| TU391308 | lncRNA | upstream | 824303 | 10998030 ~ 11001836 (+) | True | LOC113541116 |
| TU391895 | lncRNA | downstream | 47602 | 11873992 ~ 11874192 (+) | True | G330869 |
| TU391946 | lncRNA | downstream | 69276 | 11895666 ~ 11895891 (+) | True | G330908 |
| TU391950 | lncRNA | downstream | 117640 | 11944030 ~ 11946238 (+) | True | G330911 |
| TU392006 | lncRNA | downstream | 198186 | 12024576 ~ 12034059 (+) | True | G330962 |
| TU392027 | lncRNA | downstream | 315553 | 12141943 ~ 12142865 (+) | True | G330976 |
| XM_026938296.2 | mRNA | upstream | 82428 | 11717415 ~ 11743711 (+) | False | ankha |
| XM_026938297.2 | mRNA | upstream | 82428 | 11717498 ~ 11743711 (+) | False | ankha |
| XM_026937973.2 | mRNA | upstream | 272922 | 11488916 ~ 11553217 (+) | True | fam49bb |
| XM_026937960.2 | mRNA | upstream | 339834 | 11391309 ~ 11486305 (+) | True | asap1b |
| XM_026938251.2 | mRNA | upstream | 443333 | 11378301 ~ 11382806 (+) | True | LOC113541334 |
| XM_026937978.2 | mRNA | downstream | 74365 | 11900755 ~ 11943508 (+) | True | vps41 |
| XM_026937798.2 | mRNA | downstream | 235944 | 12062334 ~ 12156784 (+) | False | prkag2a |
| XM_026937799.2 | mRNA | downstream | 244785 | 12071175 ~ 12156784 (+) | False | prkag2a |
| XM_026937800.2 | mRNA | downstream | 269404 | 12095794 ~ 12156784 (+) | False | prkag2a |
| XM_034297816.1 | mRNA | downstream | 297068 | 12123458 ~ 12156784 (+) | False | prkag2a |
| TU391847 | other | upstream | 77580 | 11738158 ~ 11748559 (+) | True | ankha |
| XR_004576967.1 | other | upstream | 841930 | 10874209 ~ 10984209 (+) | True | acad11 |
| XR_003404155.2 | other | upstream | 841930 | 10874209 ~ 10984209 (+) | False | acad11 |
| XR_004576968.1 | other | upstream | 842924 | 10874209 ~ 10983215 (+) | False | acad11 |
| XR_004576969.1 | other | upstream | 842924 | 10874209 ~ 10983215 (+) | False | acad11 |
| XR_003404147.2 | other | downstream | 235942 | 12062332 ~ 12156787 (+) | True | prkag2a |
| TU392341 | other | downstream | 880549 | 12706939 ~ 12712678 (+) | True | G331263 |
| TU392569 | other | downstream | 1431504 | 13257894 ~ 13258416 (+) | True | G331476 |
| trnat-agu_17 | other | downstream | 1558811 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
| XR_004576981.1 | other | downstream | 3425245 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
