Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU392061 |
| length | 436 |
| lncRNA type | sense_over |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G331003 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 12211250 ~ 12273290 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU392027 | lncRNA | upstream | 68385 | 12141943 ~ 12142865 (+) | True | G330976 |
| TU392006 | lncRNA | upstream | 177191 | 12024576 ~ 12034059 (+) | True | G330962 |
| TU391950 | lncRNA | upstream | 265012 | 11944030 ~ 11946238 (+) | True | G330911 |
| TU391946 | lncRNA | upstream | 315359 | 11895666 ~ 11895891 (+) | True | G330908 |
| TU391895 | lncRNA | upstream | 337058 | 11873992 ~ 11874192 (+) | True | G330869 |
| TU392238 | lncRNA | downstream | 175472 | 12448762 ~ 12450347 (+) | True | G331161 |
| TU392342 | lncRNA | downstream | 437229 | 12710519 ~ 12712678 (+) | False | G331263 |
| TU392357 | lncRNA | downstream | 459519 | 12732809 ~ 12733703 (+) | True | G331277 |
| TU392360 | lncRNA | downstream | 467827 | 12741117 ~ 12741678 (+) | True | G331280 |
| XR_003404159.2 | lncRNA | downstream | 524071 | 12797361 ~ 12802125 (+) | True | LOC113541232 |
| XM_026938259.2 | mRNA | upstream | 31629 | 12162455 ~ 12179621 (+) | True | LOC113541340 |
| XM_026937798.2 | mRNA | upstream | 54466 | 12062334 ~ 12156784 (+) | False | prkag2a |
| XM_026937799.2 | mRNA | upstream | 54466 | 12071175 ~ 12156784 (+) | False | prkag2a |
| XM_026937800.2 | mRNA | upstream | 54466 | 12095794 ~ 12156784 (+) | False | prkag2a |
| XM_034297816.1 | mRNA | upstream | 54466 | 12123458 ~ 12156784 (+) | False | prkag2a |
| XM_026938086.2 | mRNA | downstream | 155167 | 12428457 ~ 12499046 (+) | True | hs6st1b |
| XM_026938277.2 | mRNA | downstream | 433649 | 12706939 ~ 12708003 (+) | True | LOC113541349 |
| XM_034298168.1 | mRNA | downstream | 437336 | 12710626 ~ 12712651 (+) | True | ccl34b.4 |
| XM_026938097.2 | mRNA | downstream | 493270 | 12766560 ~ 13015109 (+) | True | LOC113541231 |
| XM_026938128.2 | mRNA | downstream | 747877 | 13021167 ~ 13042516 (+) | True | cul1b |
| XR_003404147.2 | other | upstream | 54463 | 12062332 ~ 12156787 (+) | True | prkag2a |
| TU391847 | other | upstream | 462691 | 11738158 ~ 11748559 (+) | True | ankha |
| XR_003404155.2 | other | upstream | 1227041 | 10874209 ~ 10984209 (+) | False | acad11 |
| TU392341 | other | downstream | 433649 | 12706939 ~ 12712678 (+) | True | G331263 |
| TU392569 | other | downstream | 984604 | 13257894 ~ 13258416 (+) | True | G331476 |
| trnat-agu_17 | other | downstream | 1111911 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
| XR_004576981.1 | other | downstream | 2978345 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
| TU393912 | other | downstream | 3292885 | 15566175 ~ 15566663 (+) | True | G332636 |
