Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU392426 |
| length | 818 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G331343 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 13051042 ~ 13051859 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU392425 | lncRNA | upstream | 1590 | 13044315 ~ 13049452 (+) | True | G331342 |
| XR_003404159.2 | lncRNA | upstream | 248917 | 12797361 ~ 12802125 (+) | True | LOC113541232 |
| TU392360 | lncRNA | upstream | 309364 | 12741117 ~ 12741678 (+) | True | G331280 |
| TU392357 | lncRNA | upstream | 317339 | 12732809 ~ 12733703 (+) | True | G331277 |
| TU392342 | lncRNA | upstream | 338364 | 12710519 ~ 12712678 (+) | False | G331263 |
| TU392427 | lncRNA | downstream | 2426 | 13054285 ~ 13054519 (+) | True | G331344 |
| TU392428 | lncRNA | downstream | 4659 | 13056518 ~ 13057241 (+) | True | G331345 |
| TU392432 | lncRNA | downstream | 9476 | 13061335 ~ 13061659 (+) | True | G331348 |
| TU392433 | lncRNA | downstream | 12844 | 13064703 ~ 13065447 (+) | True | G331349 |
| TU392525 | lncRNA | downstream | 135977 | 13187836 ~ 13189955 (+) | True | G331441 |
| XM_026938128.2 | mRNA | upstream | 8526 | 13021167 ~ 13042516 (+) | True | cul1b |
| XM_026938097.2 | mRNA | upstream | 35933 | 12766560 ~ 13015109 (+) | True | LOC113541231 |
| XM_034298168.1 | mRNA | upstream | 338391 | 12710626 ~ 12712651 (+) | True | ccl34b.4 |
| XM_026938277.2 | mRNA | upstream | 343039 | 12706939 ~ 12708003 (+) | True | LOC113541349 |
| XM_026938086.2 | mRNA | upstream | 551996 | 12428457 ~ 12499046 (+) | True | hs6st1b |
| XM_026937922.2 | mRNA | downstream | 222801 | 13274660 ~ 13278025 (+) | True | skida1 |
| XM_026938109.2 | mRNA | downstream | 270478 | 13322337 ~ 13334525 (+) | True | armc3 |
| XM_026938148.2 | mRNA | downstream | 284479 | 13336338 ~ 13341661 (+) | True | msrb2 |
| XM_026938165.2 | mRNA | downstream | 291887 | 13343746 ~ 13350216 (+) | True | c8g |
| XM_026938162.2 | mRNA | downstream | 321705 | 13373564 ~ 13379652 (+) | True | klhl15 |
| TU392341 | other | upstream | 338364 | 12706939 ~ 12712678 (+) | True | G331263 |
| XR_003404147.2 | other | upstream | 894255 | 12062332 ~ 12156787 (+) | True | prkag2a |
| TU391847 | other | upstream | 1302483 | 11738158 ~ 11748559 (+) | True | ankha |
| XR_004576969.1 | other | upstream | 2067827 | 10874209 ~ 10983215 (+) | False | acad11 |
| TU392569 | other | downstream | 206035 | 13257894 ~ 13258416 (+) | True | G331476 |
| trnat-agu_17 | other | downstream | 333342 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
| XR_004576981.1 | other | downstream | 2199776 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
| TU393912 | other | downstream | 2514316 | 15566175 ~ 15566663 (+) | True | G332636 |
| TU394735 | other | downstream | 4055613 | 17107472 ~ 17110027 (+) | False | hhatlb |
