Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU392507 |
| length | 858 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G331423 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 13065813 ~ 13066670 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004576954.1 | lncRNA | downstream | 43942 | 13009928 ~ 13021871 (-) | True | LOC117595777 |
| TU392499 | lncRNA | downstream | 47009 | 13012852 ~ 13018804 (-) | True | G331415 |
| TU392354 | lncRNA | downstream | 372103 | 12691960 ~ 12693710 (-) | True | G331274 |
| TU392265 | lncRNA | downstream | 563511 | 12501959 ~ 12502302 (-) | True | G331188 |
| TU392207 | lncRNA | downstream | 850562 | 12214363 ~ 12215251 (-) | True | G331142 |
| TU392617 | lncRNA | upstream | 95022 | 13161692 ~ 13198744 (-) | True | G331516 |
| TU392643 | lncRNA | upstream | 184343 | 13251013 ~ 13251562 (-) | True | G331534 |
| TU392644 | lncRNA | upstream | 194006 | 13260676 ~ 13261243 (-) | True | G331535 |
| TU392645 | lncRNA | upstream | 195667 | 13262337 ~ 13262570 (-) | True | G331536 |
| XR_004576947.1 | lncRNA | upstream | 197836 | 13264506 ~ 13268168 (-) | True | LOC117595775 |
| XM_026938282.2 | mRNA | downstream | 4112 | 13044323 ~ 13061701 (-) | True | ezh2 |
| XM_034298166.1 | mRNA | downstream | 387875 | 12676545 ~ 12677938 (-) | False | LOC113541288 |
| XM_026938178.2 | mRNA | downstream | 387878 | 12676545 ~ 12677935 (-) | True | LOC113541288 |
| XM_026938058.2 | mRNA | downstream | 411704 | 12569775 ~ 12654109 (-) | True | ek1 |
| XM_034298060.1 | mRNA | downstream | 1008386 | 12032655 ~ 12057427 (-) | False | topbp1 |
| XM_026938089.2 | mRNA | upstream | 580 | 13067250 ~ 13077326 (-) | True | pdia4 |
| XM_034297840.1 | mRNA | upstream | 13435 | 13080105 ~ 13129036 (-) | True | LOC113541106 |
| XM_026938227.2 | mRNA | upstream | 72987 | 13139657 ~ 13152923 (-) | True | LOC113541320 |
| XM_026937945.2 | mRNA | upstream | 121239 | 13187909 ~ 13258145 (-) | True | mllt10 |
| XM_026938206.2 | mRNA | upstream | 220660 | 13287330 ~ 13319439 (-) | True | pip4k2aa |
| TU392350 | other | downstream | 387880 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
| TU392351 | other | downstream | 387880 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
| TU391338 | other | downstream | 1982662 | 11082268 ~ 11083151 (-) | True | G330379 |
| XR_003404157.2 | other | downstream | 2135038 | 10923126 ~ 10930775 (-) | False | ackr4b |
| TU391129 | other | downstream | 2542550 | 10522732 ~ 10523263 (-) | True | G330185 |
| XR_003404167.2 | other | upstream | 1870216 | 14936886 ~ 14937404 (-) | False | LOC113541102 |
| TU393587 | other | upstream | 1899143 | 14965813 ~ 15065810 (-) | False | LOC113541115 |
| XR_004576965.1 | other | upstream | 3764026 | 16830696 ~ 16879884 (-) | False | oxsr1b |
| XR_004576964.1 | other | upstream | 3764026 | 16830696 ~ 16879883 (-) | False | oxsr1b |
| XR_003404146.2 | other | upstream | 4049428 | 17116098 ~ 17139685 (-) | False | zbtb47b |
