Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU392573 |
| length | 238 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G331480 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 13264349 ~ 13264586 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004576956.1 | lncRNA | upstream | 3791 | 13258456 ~ 13260558 (+) | True | LOC117595778 |
| XR_004576955.1 | lncRNA | upstream | 3791 | 13258642 ~ 13260558 (+) | False | LOC117595778 |
| TU392525 | lncRNA | upstream | 74394 | 13187836 ~ 13189955 (+) | True | G331441 |
| TU392433 | lncRNA | upstream | 198902 | 13064703 ~ 13065447 (+) | True | G331349 |
| TU392432 | lncRNA | upstream | 202690 | 13061335 ~ 13061659 (+) | True | G331348 |
| TU392575 | lncRNA | downstream | 4841 | 13269427 ~ 13269642 (+) | True | G331482 |
| TU392579 | lncRNA | downstream | 9157 | 13273743 ~ 13274041 (+) | True | G331486 |
| TU392580 | lncRNA | downstream | 9541 | 13274127 ~ 13274411 (+) | True | G331487 |
| TU392561 | lncRNA | downstream | 22861 | 13287447 ~ 13290399 (+) | True | G331468 |
| TU392595 | lncRNA | downstream | 95694 | 13360280 ~ 13361018 (+) | True | G331498 |
| XM_026938128.2 | mRNA | upstream | 221833 | 13021167 ~ 13042516 (+) | True | cul1b |
| XM_026938097.2 | mRNA | upstream | 249240 | 12766560 ~ 13015109 (+) | True | LOC113541231 |
| XM_034298168.1 | mRNA | upstream | 551698 | 12710626 ~ 12712651 (+) | True | ccl34b.4 |
| XM_026938277.2 | mRNA | upstream | 556346 | 12706939 ~ 12708003 (+) | True | LOC113541349 |
| XM_026938086.2 | mRNA | upstream | 765303 | 12428457 ~ 12499046 (+) | True | hs6st1b |
| XM_026937922.2 | mRNA | downstream | 10074 | 13274660 ~ 13278025 (+) | True | skida1 |
| XM_026938109.2 | mRNA | downstream | 57751 | 13322337 ~ 13334525 (+) | True | armc3 |
| XM_026938148.2 | mRNA | downstream | 71752 | 13336338 ~ 13341661 (+) | True | msrb2 |
| XM_026938165.2 | mRNA | downstream | 79160 | 13343746 ~ 13350216 (+) | True | c8g |
| XM_026938162.2 | mRNA | downstream | 108978 | 13373564 ~ 13379652 (+) | True | klhl15 |
| TU392569 | other | upstream | 5933 | 13257894 ~ 13258416 (+) | True | G331476 |
| TU392341 | other | upstream | 551671 | 12706939 ~ 12712678 (+) | True | G331263 |
| XR_003404147.2 | other | upstream | 1107562 | 12062332 ~ 12156787 (+) | True | prkag2a |
| TU391847 | other | upstream | 1515790 | 11738158 ~ 11748559 (+) | True | ankha |
| TU391206 | other | upstream | 2289434 | 10973264 ~ 10974915 (+) | True | G330257 |
| trnat-agu_17 | other | downstream | 120615 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
| XR_004576981.1 | other | downstream | 1987049 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
| TU393912 | other | downstream | 2301589 | 15566175 ~ 15566663 (+) | True | G332636 |
| TU394735 | other | downstream | 3842886 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394736 | other | downstream | 3842886 | 17107472 ~ 17110027 (+) | False | hhatlb |
