Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU392617 |
| length | 903 |
| lncRNA type | sense_over |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G331516 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 13161692 ~ 13198744 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU392507 | lncRNA | downstream | 95022 | 13065813 ~ 13066670 (-) | True | G331423 |
| XR_004576954.1 | lncRNA | downstream | 139821 | 13009928 ~ 13021871 (-) | True | LOC117595777 |
| TU392499 | lncRNA | downstream | 142888 | 13012852 ~ 13018804 (-) | True | G331415 |
| TU392354 | lncRNA | downstream | 467982 | 12691960 ~ 12693710 (-) | True | G331274 |
| TU392265 | lncRNA | downstream | 659390 | 12501959 ~ 12502302 (-) | True | G331188 |
| TU392643 | lncRNA | upstream | 52269 | 13251013 ~ 13251562 (-) | True | G331534 |
| TU392644 | lncRNA | upstream | 61932 | 13260676 ~ 13261243 (-) | True | G331535 |
| TU392645 | lncRNA | upstream | 63593 | 13262337 ~ 13262570 (-) | True | G331536 |
| XR_004576947.1 | lncRNA | upstream | 65762 | 13264506 ~ 13268168 (-) | True | LOC117595775 |
| TU392648 | lncRNA | upstream | 69806 | 13268550 ~ 13268886 (-) | True | G331539 |
| XM_026938227.2 | mRNA | downstream | 8769 | 13139657 ~ 13152923 (-) | True | LOC113541320 |
| XM_034297840.1 | mRNA | downstream | 32656 | 13080105 ~ 13129036 (-) | True | LOC113541106 |
| XM_026938089.2 | mRNA | downstream | 84366 | 13067250 ~ 13077326 (-) | True | pdia4 |
| XM_026938282.2 | mRNA | downstream | 99991 | 13044323 ~ 13061701 (-) | True | ezh2 |
| XM_034298166.1 | mRNA | downstream | 483754 | 12676545 ~ 12677938 (-) | False | LOC113541288 |
| XM_026938206.2 | mRNA | upstream | 88586 | 13287330 ~ 13319439 (-) | True | pip4k2aa |
| XM_026938161.2 | mRNA | upstream | 152597 | 13351341 ~ 13360097 (-) | True | zfx |
| XM_034298206.1 | mRNA | upstream | 162625 | 13361369 ~ 13372043 (-) | True | eif2s3 |
| XM_026938164.2 | mRNA | upstream | 162625 | 13361369 ~ 13372011 (-) | False | eif2s3 |
| XM_026937940.2 | mRNA | upstream | 198524 | 13397268 ~ 13406077 (-) | True | cct5 |
| TU392350 | other | downstream | 483759 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
| TU392351 | other | downstream | 483759 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
| TU391338 | other | downstream | 2078541 | 11082268 ~ 11083151 (-) | True | G330379 |
| XR_003404157.2 | other | downstream | 2230917 | 10923126 ~ 10930775 (-) | False | ackr4b |
| TU391129 | other | downstream | 2638429 | 10522732 ~ 10523263 (-) | True | G330185 |
| XR_003404167.2 | other | upstream | 1738142 | 14936886 ~ 14937404 (-) | False | LOC113541102 |
| TU393587 | other | upstream | 1767069 | 14965813 ~ 15065810 (-) | False | LOC113541115 |
| XR_004576965.1 | other | upstream | 3631952 | 16830696 ~ 16879884 (-) | False | oxsr1b |
| XR_004576964.1 | other | upstream | 3631952 | 16830696 ~ 16879883 (-) | False | oxsr1b |
| XR_003404146.2 | other | upstream | 3917354 | 17116098 ~ 17139685 (-) | False | zbtb47b |
