Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU393268 |
| length | 938 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G332111 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 14688163 ~ 14703270 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004576995.1 | lncRNA | upstream | 725979 | 13958024 ~ 13962184 (+) | True | LOC117595809 |
| TU392599 | lncRNA | upstream | 1305527 | 13380644 ~ 13382636 (+) | True | G331502 |
| TU392593 | lncRNA | upstream | 1325461 | 13361369 ~ 13362702 (+) | True | G331496 |
| TU392595 | lncRNA | upstream | 1327145 | 13360280 ~ 13361018 (+) | True | G331498 |
| TU392561 | lncRNA | upstream | 1397764 | 13287447 ~ 13290399 (+) | True | G331468 |
| TU393426 | lncRNA | downstream | 241721 | 14944991 ~ 14945212 (+) | True | G332238 |
| TU393440 | lncRNA | downstream | 252590 | 14955860 ~ 14956067 (+) | True | G332248 |
| TU393531 | lncRNA | downstream | 362705 | 15065975 ~ 15113514 (+) | True | G332334 |
| TU393529 | lncRNA | downstream | 408393 | 15111663 ~ 15112523 (+) | False | G332334 |
| TU393555 | lncRNA | downstream | 498547 | 15201817 ~ 15202305 (+) | True | G332348 |
| XM_026937982.2 | mRNA | upstream | 110920 | 14566563 ~ 14577243 (+) | False | pabpn1 |
| XM_026937980.2 | mRNA | upstream | 110921 | 14565792 ~ 14577242 (+) | True | pabpn1 |
| XM_026937981.2 | mRNA | upstream | 112533 | 14565793 ~ 14575630 (+) | False | pabpn1 |
| XM_026937931.2 | mRNA | upstream | 123489 | 14543991 ~ 14564674 (+) | True | zfhx2 |
| XM_026937930.2 | mRNA | upstream | 123489 | 14543991 ~ 14564674 (+) | False | zfhx2 |
| XM_026937830.2 | mRNA | downstream | 11525 | 14714795 ~ 14721577 (+) | True | xkr9 |
| XM_034298216.1 | mRNA | downstream | 93374 | 14796644 ~ 14848084 (+) | False | eya1 |
| XM_026938195.2 | mRNA | downstream | 93374 | 14796644 ~ 14848083 (+) | True | eya1 |
| XM_026938197.2 | mRNA | downstream | 93374 | 14796644 ~ 14848083 (+) | False | eya1 |
| XM_034298215.1 | mRNA | downstream | 93374 | 14796644 ~ 14848083 (+) | False | eya1 |
| trnat-agu_17 | other | upstream | 1302889 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
| TU392569 | other | upstream | 1429747 | 13257894 ~ 13258416 (+) | True | G331476 |
| TU392341 | other | upstream | 1975485 | 12706939 ~ 12712678 (+) | True | G331263 |
| XR_003404147.2 | other | upstream | 2531376 | 12062332 ~ 12156787 (+) | True | prkag2a |
| TU391847 | other | upstream | 2939604 | 11738158 ~ 11748559 (+) | True | ankha |
| XR_004576981.1 | other | downstream | 548365 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
| TU393912 | other | downstream | 862905 | 15566175 ~ 15566663 (+) | True | G332636 |
| TU394735 | other | downstream | 2404202 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394736 | other | downstream | 2404202 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394798 | other | downstream | 2581812 | 17285082 ~ 17300011 (+) | True | G333388 |
