Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU393373 |
| length | 470 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G332196 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 14714217 ~ 14797198 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU393330 | lncRNA | downstream | 79291 | 14544032 ~ 14634926 (-) | True | G332164 |
| TU393312 | lncRNA | downstream | 149513 | 14537252 ~ 14564704 (-) | True | G332147 |
| TU393340 | lncRNA | downstream | 191602 | 14513735 ~ 14522615 (-) | True | G332169 |
| TU393341 | lncRNA | downstream | 192569 | 14517639 ~ 14521648 (-) | False | G332169 |
| TU393198 | lncRNA | downstream | 247604 | 14466394 ~ 14466613 (-) | True | G332056 |
| TU393844 | lncRNA | upstream | 548074 | 15345272 ~ 15397132 (-) | True | G332580 |
| TU393913 | lncRNA | upstream | 768989 | 15566187 ~ 15566646 (-) | True | G332637 |
| TU393941 | lncRNA | upstream | 818302 | 15615500 ~ 15618841 (-) | False | sec61g |
| TU393956 | lncRNA | upstream | 823308 | 15620506 ~ 15620717 (-) | True | G332676 |
| TU393962 | lncRNA | upstream | 833025 | 15630223 ~ 15630444 (-) | True | G332682 |
| XM_026938257.2 | mRNA | downstream | 3395 | 14702024 ~ 14710822 (-) | True | tram1 |
| XM_026937935.2 | mRNA | downstream | 18609 | 14635686 ~ 14695608 (-) | False | ncoa2 |
| XM_026937934.2 | mRNA | downstream | 18609 | 14635686 ~ 14695608 (-) | True | ncoa2 |
| XM_026937936.2 | mRNA | downstream | 23786 | 14635686 ~ 14690431 (-) | False | ncoa2 |
| XM_026937937.2 | mRNA | downstream | 54914 | 14635686 ~ 14659303 (-) | False | ncoa2 |
| XM_026937894.2 | mRNA | upstream | 135797 | 14932995 ~ 14937404 (-) | False | LOC113541102 |
| XM_034298171.1 | mRNA | upstream | 135798 | 14932996 ~ 14937404 (-) | True | LOC113541102 |
| XM_034297847.1 | mRNA | upstream | 148461 | 14945659 ~ 14954678 (-) | False | terf1 |
| XM_026937821.2 | mRNA | upstream | 148461 | 14945659 ~ 14954676 (-) | True | terf1 |
| XM_034297848.1 | mRNA | upstream | 148815 | 14946013 ~ 14954679 (-) | False | terf1 |
| TU392350 | other | downstream | 2036284 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
| TU392351 | other | downstream | 2036284 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
| TU391338 | other | downstream | 3631066 | 11082268 ~ 11083151 (-) | True | G330379 |
| XR_003404157.2 | other | downstream | 3783442 | 10923126 ~ 10930775 (-) | False | ackr4b |
| TU391129 | other | downstream | 4190954 | 10522732 ~ 10523263 (-) | True | G330185 |
| XR_003404167.2 | other | upstream | 139688 | 14936886 ~ 14937404 (-) | False | LOC113541102 |
| TU393587 | other | upstream | 168615 | 14965813 ~ 15065810 (-) | False | LOC113541115 |
| XR_004576965.1 | other | upstream | 2033498 | 16830696 ~ 16879884 (-) | False | oxsr1b |
| XR_004576964.1 | other | upstream | 2033498 | 16830696 ~ 16879883 (-) | False | oxsr1b |
| XR_003404146.2 | other | upstream | 2318900 | 17116098 ~ 17139685 (-) | False | zbtb47b |
