Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU393844 |
| length | 384 |
| lncRNA type | sense_over |
| GC content | 0.28 |
| exon number | 2 |
| gene id | G332580 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 15345272 ~ 15397132 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU393373 | lncRNA | downstream | 548074 | 14714217 ~ 14797198 (-) | True | G332196 |
| TU393330 | lncRNA | downstream | 710346 | 14544032 ~ 14634926 (-) | True | G332164 |
| TU393312 | lncRNA | downstream | 780568 | 14537252 ~ 14564704 (-) | True | G332147 |
| TU393340 | lncRNA | downstream | 822657 | 14513735 ~ 14522615 (-) | True | G332169 |
| TU393341 | lncRNA | downstream | 823624 | 14517639 ~ 14521648 (-) | False | G332169 |
| TU393913 | lncRNA | upstream | 169055 | 15566187 ~ 15566646 (-) | True | G332637 |
| TU393941 | lncRNA | upstream | 218368 | 15615500 ~ 15618841 (-) | False | sec61g |
| TU393956 | lncRNA | upstream | 223374 | 15620506 ~ 15620717 (-) | True | G332676 |
| TU393962 | lncRNA | upstream | 233091 | 15630223 ~ 15630444 (-) | True | G332682 |
| XR_003404161.2 | lncRNA | upstream | 538696 | 15935828 ~ 15943189 (-) | True | LOC113541266 |
| XM_034297961.1 | mRNA | downstream | 56507 | 15285508 ~ 15288765 (-) | True | LOC117595668 |
| XM_026938248.2 | mRNA | downstream | 61117 | 15276583 ~ 15284155 (-) | True | LOC113541332 |
| XM_034297841.1 | mRNA | downstream | 70196 | 15273126 ~ 15275076 (-) | True | LOC117595763 |
| XM_034298262.1 | mRNA | downstream | 76008 | 15267358 ~ 15269264 (-) | True | LOC117595804 |
| XM_026938192.2 | mRNA | downstream | 100247 | 15229216 ~ 15245025 (-) | True | rdh10a |
| XM_026937949.2 | mRNA | upstream | 1149 | 15398281 ~ 15414443 (-) | True | LOC113541141 |
| XM_026937950.2 | mRNA | upstream | 1151 | 15398283 ~ 15414441 (-) | False | LOC113541141 |
| XM_034298225.1 | mRNA | upstream | 19972 | 15417104 ~ 15559455 (-) | True | LOC113541144 |
| XM_034298226.1 | mRNA | upstream | 19972 | 15417104 ~ 15514006 (-) | False | LOC113541144 |
| XM_026937893.2 | mRNA | upstream | 182143 | 15579275 ~ 15582034 (-) | True | LOC113541101 |
| TU393587 | other | downstream | 279462 | 14965813 ~ 15065810 (-) | False | LOC113541115 |
| XR_003404167.2 | other | downstream | 407868 | 14936886 ~ 14937404 (-) | False | LOC113541102 |
| TU392350 | other | downstream | 2667339 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
| TU392351 | other | downstream | 2667339 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
| TU391338 | other | downstream | 4262121 | 11082268 ~ 11083151 (-) | True | G330379 |
| XR_004576965.1 | other | upstream | 1433564 | 16830696 ~ 16879884 (-) | False | oxsr1b |
| XR_004576964.1 | other | upstream | 1433564 | 16830696 ~ 16879883 (-) | False | oxsr1b |
| XR_003404146.2 | other | upstream | 1718966 | 17116098 ~ 17139685 (-) | False | zbtb47b |
| XR_004576994.1 | other | upstream | 1788392 | 17185524 ~ 17239106 (-) | False | vipr1b |
| TU395488 | other | upstream | 2510762 | 17907894 ~ 17908812 (-) | False | LOC113541127 |
