Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU394074 |
| length | 327 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G332791 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 16102271 ~ 16102597 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| ko04392 | Hippo signaling pathway - multiple species |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU394073 | lncRNA | upstream | 59 | 16101750 ~ 16102212 (+) | True | G332790 |
| TU394071 | lncRNA | upstream | 60684 | 16041384 ~ 16041587 (+) | True | G332788 |
| TU393930 | lncRNA | upstream | 485037 | 15592088 ~ 15617234 (+) | True | G332650 |
| XR_004576951.1 | lncRNA | upstream | 522473 | 15570863 ~ 15579798 (+) | True | LOC113541248 |
| XR_003404160.2 | lncRNA | upstream | 530454 | 15570863 ~ 15571817 (+) | False | LOC113541248 |
| TU394160 | lncRNA | downstream | 116956 | 16219553 ~ 16220945 (+) | True | G332859 |
| TU394510 | lncRNA | downstream | 493184 | 16595781 ~ 16620089 (+) | True | G333157 |
| TU394501 | lncRNA | downstream | 502551 | 16605148 ~ 16633783 (+) | True | G333148 |
| TU394614 | lncRNA | downstream | 630319 | 16732916 ~ 16829979 (+) | False | G333232 |
| TU394612 | lncRNA | downstream | 669406 | 16772003 ~ 16829979 (+) | True | G333232 |
| XM_026938236.2 | mRNA | upstream | 5500 | 16076891 ~ 16096771 (+) | True | hephl1a |
| XM_026937826.2 | mRNA | upstream | 472306 | 15620148 ~ 15629965 (+) | True | panx1a |
| XM_026937807.2 | mRNA | upstream | 487380 | 15587671 ~ 15614891 (+) | False | tpk1 |
| XM_026938234.2 | mRNA | downstream | 97899 | 16200496 ~ 16219013 (+) | False | LOC113541322 |
| XM_026938235.2 | mRNA | downstream | 99387 | 16201984 ~ 16219013 (+) | False | LOC113541322 |
| XM_026938231.2 | mRNA | downstream | 99388 | 16201985 ~ 16219013 (+) | False | LOC113541322 |
| XM_026938230.2 | mRNA | downstream | 99388 | 16201985 ~ 16219013 (+) | True | LOC113541322 |
| XM_026938232.2 | mRNA | downstream | 99388 | 16201985 ~ 16219013 (+) | False | LOC113541322 |
| TU393912 | other | upstream | 535608 | 15566175 ~ 15566663 (+) | True | G332636 |
| XR_004576981.1 | other | upstream | 837684 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
| trnat-agu_17 | other | upstream | 2716997 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
| TU392569 | other | upstream | 2843855 | 13257894 ~ 13258416 (+) | True | G331476 |
| TU392341 | other | upstream | 3389593 | 12706939 ~ 12712678 (+) | True | G331263 |
| TU394735 | other | downstream | 1004875 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394736 | other | downstream | 1004875 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394798 | other | downstream | 1182485 | 17285082 ~ 17300011 (+) | True | G333388 |
| TU394792 | other | downstream | 1184563 | 17287160 ~ 17302004 (+) | False | G333388 |
| TU394797 | other | downstream | 1184563 | 17287160 ~ 17295054 (+) | False | G333388 |
