Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU394160 |
| length | 1295 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G332859 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 16219553 ~ 16220945 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU394074 | lncRNA | upstream | 116956 | 16102271 ~ 16102597 (+) | True | G332791 |
| TU394073 | lncRNA | upstream | 117341 | 16101750 ~ 16102212 (+) | True | G332790 |
| TU394071 | lncRNA | upstream | 177966 | 16041384 ~ 16041587 (+) | True | G332788 |
| TU393930 | lncRNA | upstream | 602319 | 15592088 ~ 15617234 (+) | True | G332650 |
| XR_004576951.1 | lncRNA | upstream | 639755 | 15570863 ~ 15579798 (+) | True | LOC113541248 |
| TU394510 | lncRNA | downstream | 374836 | 16595781 ~ 16620089 (+) | True | G333157 |
| TU394501 | lncRNA | downstream | 384203 | 16605148 ~ 16633783 (+) | True | G333148 |
| TU394614 | lncRNA | downstream | 511971 | 16732916 ~ 16829979 (+) | False | G333232 |
| TU394612 | lncRNA | downstream | 551058 | 16772003 ~ 16829979 (+) | True | G333232 |
| TU394631 | lncRNA | downstream | 667961 | 16888906 ~ 16889729 (+) | False | LOC113541357 |
| XM_026938234.2 | mRNA | upstream | 540 | 16200496 ~ 16219013 (+) | False | LOC113541322 |
| XM_026938235.2 | mRNA | upstream | 540 | 16201984 ~ 16219013 (+) | False | LOC113541322 |
| XM_026938231.2 | mRNA | upstream | 540 | 16201985 ~ 16219013 (+) | False | LOC113541322 |
| XM_026938230.2 | mRNA | upstream | 540 | 16201985 ~ 16219013 (+) | True | LOC113541322 |
| XM_026938232.2 | mRNA | upstream | 540 | 16201985 ~ 16219013 (+) | False | LOC113541322 |
| XM_026938048.2 | mRNA | downstream | 106040 | 16326985 ~ 16443144 (+) | True | prex2 |
| XM_034298091.1 | mRNA | downstream | 131829 | 16352774 ~ 16443144 (+) | False | prex2 |
| XM_026937906.2 | mRNA | downstream | 223718 | 16444663 ~ 16529117 (+) | True | c22h8orf34 |
| XM_034298094.1 | mRNA | downstream | 316708 | 16537653 ~ 16632052 (+) | True | sulf1 |
| XM_026938283.2 | mRNA | downstream | 418160 | 16639105 ~ 16684971 (+) | True | LOC113541353 |
| TU393912 | other | upstream | 652890 | 15566175 ~ 15566663 (+) | True | G332636 |
| XR_004576981.1 | other | upstream | 954966 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
| trnat-agu_17 | other | upstream | 2834279 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
| TU392569 | other | upstream | 2961137 | 13257894 ~ 13258416 (+) | True | G331476 |
| TU392341 | other | upstream | 3506875 | 12706939 ~ 12712678 (+) | True | G331263 |
| TU394735 | other | downstream | 886527 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394736 | other | downstream | 886527 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394798 | other | downstream | 1064137 | 17285082 ~ 17300011 (+) | True | G333388 |
| TU394792 | other | downstream | 1066215 | 17287160 ~ 17302004 (+) | False | G333388 |
| TU394797 | other | downstream | 1066215 | 17287160 ~ 17295054 (+) | False | G333388 |
