Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU394614 |
| length | 614 |
| lncRNA type | sense_over |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G333232 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 16732916 ~ 16829979 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU394501 | lncRNA | upstream | 99133 | 16605148 ~ 16633783 (+) | True | G333148 |
| TU394510 | lncRNA | upstream | 112827 | 16595781 ~ 16620089 (+) | True | G333157 |
| TU394160 | lncRNA | upstream | 511971 | 16219553 ~ 16220945 (+) | True | G332859 |
| TU394074 | lncRNA | upstream | 630319 | 16102271 ~ 16102597 (+) | True | G332791 |
| TU394073 | lncRNA | upstream | 630704 | 16101750 ~ 16102212 (+) | True | G332790 |
| TU394631 | lncRNA | downstream | 58927 | 16888906 ~ 16889729 (+) | False | LOC113541357 |
| XR_003404172.2 | lncRNA | downstream | 58958 | 16888937 ~ 16890161 (+) | True | LOC113541357 |
| TU394629 | lncRNA | downstream | 63027 | 16893006 ~ 16897855 (+) | True | G333244 |
| TU394762 | lncRNA | downstream | 356150 | 17186129 ~ 17186675 (+) | True | G333360 |
| TU395018 | lncRNA | downstream | 532892 | 17362871 ~ 17363075 (+) | True | G333548 |
| XM_026938283.2 | mRNA | upstream | 47945 | 16639105 ~ 16684971 (+) | True | LOC113541353 |
| XM_034298094.1 | mRNA | upstream | 100864 | 16537653 ~ 16632052 (+) | True | sulf1 |
| XM_026937906.2 | mRNA | upstream | 203799 | 16444663 ~ 16529117 (+) | True | c22h8orf34 |
| XM_026938048.2 | mRNA | upstream | 289772 | 16326985 ~ 16443144 (+) | True | prex2 |
| XM_034298091.1 | mRNA | upstream | 289772 | 16352774 ~ 16443144 (+) | False | prex2 |
| XM_034297857.1 | mRNA | downstream | 123705 | 16953684 ~ 16960846 (+) | True | acaa1 |
| XM_026937977.2 | mRNA | downstream | 155068 | 16985047 ~ 17014794 (+) | True | plcd1a |
| XM_034297855.1 | mRNA | downstream | 155433 | 16985412 ~ 17014794 (+) | False | plcd1a |
| XM_026937976.2 | mRNA | downstream | 156935 | 16986914 ~ 17014794 (+) | False | plcd1a |
| XM_034298161.1 | mRNA | downstream | 244234 | 17074213 ~ 17085476 (+) | True | spag6 |
| TU393912 | other | upstream | 1166253 | 15566175 ~ 15566663 (+) | True | G332636 |
| XR_004576981.1 | other | upstream | 1468329 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
| trnat-agu_17 | other | upstream | 3347642 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
| TU392569 | other | upstream | 3474500 | 13257894 ~ 13258416 (+) | True | G331476 |
| TU392341 | other | upstream | 4020238 | 12706939 ~ 12712678 (+) | True | G331263 |
| TU394735 | other | downstream | 277493 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394736 | other | downstream | 277493 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394798 | other | downstream | 455103 | 17285082 ~ 17300011 (+) | True | G333388 |
| TU394792 | other | downstream | 457181 | 17287160 ~ 17302004 (+) | False | G333388 |
| TU394797 | other | downstream | 457181 | 17287160 ~ 17295054 (+) | False | G333388 |
