Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU394762 |
| length | 547 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G333360 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 17186129 ~ 17186675 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU394629 | lncRNA | upstream | 288274 | 16893006 ~ 16897855 (+) | True | G333244 |
| XR_003404172.2 | lncRNA | upstream | 295968 | 16888937 ~ 16890161 (+) | True | LOC113541357 |
| TU394631 | lncRNA | upstream | 296400 | 16888906 ~ 16889729 (+) | False | LOC113541357 |
| TU394614 | lncRNA | upstream | 356150 | 16732916 ~ 16829979 (+) | False | G333232 |
| TU394612 | lncRNA | upstream | 356150 | 16772003 ~ 16829979 (+) | True | G333232 |
| TU395018 | lncRNA | downstream | 176196 | 17362871 ~ 17363075 (+) | True | G333548 |
| TU395063 | lncRNA | downstream | 259510 | 17446185 ~ 17447043 (+) | True | G333582 |
| TU395113 | lncRNA | downstream | 353962 | 17540637 ~ 17541761 (+) | False | rnf6 |
| TU395303 | lncRNA | downstream | 480961 | 17667636 ~ 17667844 (+) | True | G333787 |
| TU395307 | lncRNA | downstream | 483741 | 17670416 ~ 17670625 (+) | True | G333791 |
| XM_034298269.1 | mRNA | upstream | 14531 | 17163000 ~ 17171598 (+) | True | sec22c |
| XM_026938204.2 | mRNA | upstream | 14531 | 17163000 ~ 17171598 (+) | False | sec22c |
| XM_026937903.2 | mRNA | upstream | 70353 | 17111768 ~ 17115776 (+) | True | klhl40b |
| XM_034297884.1 | mRNA | upstream | 76356 | 17100164 ~ 17109773 (+) | False | hhatlb |
| XM_026937901.2 | mRNA | upstream | 76356 | 17101170 ~ 17109773 (+) | True | hhatlb |
| XM_026938185.2 | mRNA | downstream | 98429 | 17285104 ~ 17286736 (+) | True | LOC113541296 |
| XM_034298096.1 | mRNA | downstream | 100465 | 17287140 ~ 17290895 (+) | True | LOC117595788 |
| XM_026938186.2 | mRNA | downstream | 109898 | 17296573 ~ 17299390 (+) | True | LOC113541297 |
| XM_026937860.2 | mRNA | downstream | 124046 | 17310721 ~ 17315700 (+) | True | fam162a |
| XM_026938246.2 | mRNA | downstream | 143159 | 17329834 ~ 17333509 (+) | True | si:ch211-161h7.8 |
| TU394735 | other | upstream | 76102 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394736 | other | upstream | 76102 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU393912 | other | upstream | 1619466 | 15566175 ~ 15566663 (+) | True | G332636 |
| XR_004576981.1 | other | upstream | 1921542 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
| trnat-agu_17 | other | upstream | 3800855 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
| TU394798 | other | downstream | 98407 | 17285082 ~ 17300011 (+) | True | G333388 |
| TU394792 | other | downstream | 100485 | 17287160 ~ 17302004 (+) | False | G333388 |
| TU394797 | other | downstream | 100485 | 17287160 ~ 17295054 (+) | False | G333388 |
| TU394801 | other | downstream | 100485 | 17287160 ~ 17300011 (+) | False | G333388 |
| TU394805 | other | downstream | 100485 | 17287160 ~ 17291065 (+) | False | G333388 |
