Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU394792 |
| length | 794 |
| RNA type | TUCP |
| GC content | 0.39 |
| exon number | 6 |
| gene id | G333388 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 17285082 ~ 17302004 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU394762 | lncRNA | upstream | 100485 | 17186129 ~ 17186675 (+) | True | G333360 |
| TU394629 | lncRNA | upstream | 389305 | 16893006 ~ 16897855 (+) | True | G333244 |
| XR_003404172.2 | lncRNA | upstream | 396999 | 16888937 ~ 16890161 (+) | True | LOC113541357 |
| TU394631 | lncRNA | upstream | 397431 | 16888906 ~ 16889729 (+) | False | LOC113541357 |
| TU394612 | lncRNA | upstream | 457181 | 16772003 ~ 16829979 (+) | True | G333232 |
| TU395018 | lncRNA | downstream | 60867 | 17362871 ~ 17363075 (+) | True | G333548 |
| TU395063 | lncRNA | downstream | 144181 | 17446185 ~ 17447043 (+) | True | G333582 |
| TU395113 | lncRNA | downstream | 238633 | 17540637 ~ 17541761 (+) | False | rnf6 |
| TU395303 | lncRNA | downstream | 365632 | 17667636 ~ 17667844 (+) | True | G333787 |
| TU395307 | lncRNA | downstream | 368412 | 17670416 ~ 17670625 (+) | True | G333791 |
| XM_026938185.2 | mRNA | upstream | 424 | 17285104 ~ 17286736 (+) | True | LOC113541296 |
| XM_034298269.1 | mRNA | upstream | 115562 | 17163000 ~ 17171598 (+) | True | sec22c |
| XM_026938204.2 | mRNA | upstream | 115562 | 17163000 ~ 17171598 (+) | False | sec22c |
| XM_026937903.2 | mRNA | upstream | 171384 | 17111768 ~ 17115776 (+) | True | klhl40b |
| XM_034297884.1 | mRNA | upstream | 177387 | 17100164 ~ 17109773 (+) | False | hhatlb |
| XM_026937860.2 | mRNA | downstream | 8717 | 17310721 ~ 17315700 (+) | True | fam162a |
| XM_026938246.2 | mRNA | downstream | 27830 | 17329834 ~ 17333509 (+) | True | si:ch211-161h7.8 |
| XM_034298150.1 | mRNA | downstream | 34188 | 17336192 ~ 17353309 (+) | True | drd3 |
| XM_026938106.2 | mRNA | downstream | 34188 | 17336192 ~ 17353309 (+) | False | drd3 |
| XM_026938210.2 | mRNA | downstream | 76297 | 17378301 ~ 17390639 (+) | True | ccdc191 |
| TU394735 | other | upstream | 177133 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394736 | other | upstream | 177133 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU393912 | other | upstream | 1720497 | 15566175 ~ 15566663 (+) | True | G332636 |
| XR_004576981.1 | other | upstream | 2022573 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
| trnat-agu_17 | other | upstream | 3901886 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
| TU395491 | other | downstream | 684758 | 17986762 ~ 17993014 (+) | True | G333943 |
| XR_004576961.1 | other | downstream | 1013352 | 18315356 ~ 18323295 (+) | False | mtfr1 |
| XR_004576962.1 | other | downstream | 1013354 | 18315358 ~ 18323295 (+) | False | mtfr1 |
| XR_004576959.1 | other | downstream | 1013356 | 18315360 ~ 18323295 (+) | False | mtfr1 |
| XR_004576960.1 | other | downstream | 1013679 | 18315683 ~ 18323295 (+) | True | mtfr1 |
