Item | Value |
---|---|
RNA id | TU394801 |
length | 1320 |
RNA type | TUCP |
GC content | 0.36 |
exon number | 4 |
gene id | G333388 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047616.1 |
NCBI id | CM018562.1 |
chromosome length | 21037487 |
location | 17285082 ~ 17302004 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU394762 | lncRNA | upstream | 100485 | 17186129 ~ 17186675 (+) | True | G333360 |
TU394629 | lncRNA | upstream | 389305 | 16893006 ~ 16897855 (+) | True | G333244 |
XR_003404172.2 | lncRNA | upstream | 396999 | 16888937 ~ 16890161 (+) | True | LOC113541357 |
TU394631 | lncRNA | upstream | 397431 | 16888906 ~ 16889729 (+) | False | LOC113541357 |
TU394612 | lncRNA | upstream | 457181 | 16772003 ~ 16829979 (+) | True | G333232 |
TU395018 | lncRNA | downstream | 62860 | 17362871 ~ 17363075 (+) | True | G333548 |
TU395063 | lncRNA | downstream | 146174 | 17446185 ~ 17447043 (+) | True | G333582 |
TU395113 | lncRNA | downstream | 240626 | 17540637 ~ 17541761 (+) | False | rnf6 |
TU395303 | lncRNA | downstream | 367625 | 17667636 ~ 17667844 (+) | True | G333787 |
TU395307 | lncRNA | downstream | 370405 | 17670416 ~ 17670625 (+) | True | G333791 |
XM_026938185.2 | mRNA | upstream | 424 | 17285104 ~ 17286736 (+) | True | LOC113541296 |
XM_034298269.1 | mRNA | upstream | 115562 | 17163000 ~ 17171598 (+) | True | sec22c |
XM_026938204.2 | mRNA | upstream | 115562 | 17163000 ~ 17171598 (+) | False | sec22c |
XM_026937903.2 | mRNA | upstream | 171384 | 17111768 ~ 17115776 (+) | True | klhl40b |
XM_026937901.2 | mRNA | upstream | 177387 | 17101170 ~ 17109773 (+) | True | hhatlb |
XM_026937860.2 | mRNA | downstream | 10710 | 17310721 ~ 17315700 (+) | True | fam162a |
XM_026938246.2 | mRNA | downstream | 29823 | 17329834 ~ 17333509 (+) | True | si:ch211-161h7.8 |
XM_034298150.1 | mRNA | downstream | 36181 | 17336192 ~ 17353309 (+) | True | drd3 |
XM_026938106.2 | mRNA | downstream | 36181 | 17336192 ~ 17353309 (+) | False | drd3 |
XM_026938210.2 | mRNA | downstream | 78290 | 17378301 ~ 17390639 (+) | True | ccdc191 |
TU394735 | other | upstream | 177133 | 17107472 ~ 17110027 (+) | False | hhatlb |
TU394736 | other | upstream | 177133 | 17107472 ~ 17110027 (+) | False | hhatlb |
TU393912 | other | upstream | 1720497 | 15566175 ~ 15566663 (+) | True | G332636 |
XR_004576981.1 | other | upstream | 2022573 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
trnat-agu_17 | other | upstream | 3901886 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
TU395491 | other | downstream | 686751 | 17986762 ~ 17993014 (+) | True | G333943 |
XR_004576961.1 | other | downstream | 1015345 | 18315356 ~ 18323295 (+) | False | mtfr1 |
XR_004576962.1 | other | downstream | 1015347 | 18315358 ~ 18323295 (+) | False | mtfr1 |
XR_004576959.1 | other | downstream | 1015349 | 18315360 ~ 18323295 (+) | False | mtfr1 |
XR_004576960.1 | other | downstream | 1015672 | 18315683 ~ 18323295 (+) | True | mtfr1 |