Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU394901 |
| length | 233 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G333452 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 17030465 ~ 17030697 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU394860 | lncRNA | downstream | 21732 | 17007827 ~ 17008733 (-) | True | G333417 |
| TU394880 | lncRNA | downstream | 75002 | 16953725 ~ 16955463 (-) | True | G333434 |
| TU394875 | lncRNA | downstream | 138638 | 16891437 ~ 16891827 (-) | True | G333429 |
| TU394874 | lncRNA | downstream | 139101 | 16891128 ~ 16891364 (-) | True | G333428 |
| TU394873 | lncRNA | downstream | 139474 | 16890184 ~ 16890991 (-) | True | G333427 |
| TU394903 | lncRNA | upstream | 6470 | 17037167 ~ 17037512 (-) | True | G333454 |
| TU394919 | lncRNA | upstream | 55186 | 17085883 ~ 17086204 (-) | True | G333470 |
| TU394977 | lncRNA | upstream | 255056 | 17285753 ~ 17299701 (-) | True | G333525 |
| TU394987 | lncRNA | upstream | 255056 | 17285753 ~ 17291010 (-) | False | G333525 |
| TU394988 | lncRNA | upstream | 256559 | 17287256 ~ 17295034 (-) | False | G333525 |
| XM_026938293.2 | mRNA | downstream | 1572 | 17015624 ~ 17028893 (-) | True | vill |
| XM_026938294.2 | mRNA | downstream | 1607 | 17015624 ~ 17028858 (-) | False | vill |
| XM_034297854.1 | mRNA | downstream | 41429 | 16960853 ~ 16989036 (-) | False | dlec1 |
| XM_026938112.2 | mRNA | downstream | 49389 | 16960853 ~ 16981076 (-) | True | dlec1 |
| XM_026938113.2 | mRNA | downstream | 49390 | 16960853 ~ 16981075 (-) | False | dlec1 |
| XM_026938154.2 | mRNA | upstream | 163 | 17030860 ~ 17073642 (-) | False | ctdspla |
| XM_026938152.2 | mRNA | upstream | 163 | 17030860 ~ 17073642 (-) | True | ctdspla |
| XM_026937796.2 | mRNA | upstream | 85401 | 17116098 ~ 17139685 (-) | True | zbtb47b |
| XM_034298271.1 | mRNA | upstream | 85401 | 17116098 ~ 17138942 (-) | False | zbtb47b |
| XM_026938200.2 | mRNA | upstream | 111764 | 17142461 ~ 17161207 (-) | True | nktr |
| XR_004576965.1 | other | downstream | 150581 | 16830696 ~ 16879884 (-) | False | oxsr1b |
| XR_004576964.1 | other | downstream | 150582 | 16830696 ~ 16879883 (-) | False | oxsr1b |
| TU393587 | other | downstream | 1964655 | 14965813 ~ 15065810 (-) | False | LOC113541115 |
| XR_003404167.2 | other | downstream | 2093061 | 14936886 ~ 14937404 (-) | False | LOC113541102 |
| TU392350 | other | downstream | 4352532 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
| XR_003404146.2 | other | upstream | 85401 | 17116098 ~ 17139685 (-) | False | zbtb47b |
| XR_004576994.1 | other | upstream | 154827 | 17185524 ~ 17239106 (-) | False | vipr1b |
| TU395488 | other | upstream | 877197 | 17907894 ~ 17908812 (-) | False | LOC113541127 |
| XR_004576970.1 | other | upstream | 879241 | 17909938 ~ 17916556 (-) | False | c22h11orf65 |
| TU395529 | other | upstream | 894378 | 17925075 ~ 17926835 (-) | False | zmp:0000000991 |
