Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU394987 |
| length | 1107 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G333525 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 17285753 ~ 17301996 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU394919 | lncRNA | downstream | 199549 | 17085883 ~ 17086204 (-) | True | G333470 |
| TU394903 | lncRNA | downstream | 248241 | 17037167 ~ 17037512 (-) | True | G333454 |
| TU394901 | lncRNA | downstream | 255056 | 17030465 ~ 17030697 (-) | True | G333452 |
| TU394860 | lncRNA | downstream | 277020 | 17007827 ~ 17008733 (-) | True | G333417 |
| TU394880 | lncRNA | downstream | 330290 | 16953725 ~ 16955463 (-) | True | G333434 |
| TU394994 | lncRNA | upstream | 2365 | 17293375 ~ 17298446 (-) | True | G333527 |
| TU395143 | lncRNA | upstream | 87286 | 17378296 ~ 17378572 (-) | True | G333649 |
| TU395144 | lncRNA | upstream | 89845 | 17380855 ~ 17381236 (-) | True | G333650 |
| TU395146 | lncRNA | upstream | 92732 | 17383742 ~ 17384023 (-) | True | G333652 |
| TU395147 | lncRNA | upstream | 94269 | 17385279 ~ 17385646 (-) | True | G333653 |
| XM_026938267.2 | mRNA | downstream | 4130 | 17277404 ~ 17281623 (-) | True | si:ch211-161h7.5 |
| XM_026938256.2 | mRNA | downstream | 9625 | 17266256 ~ 17276128 (-) | True | si:ch211-161h7.4 |
| XM_034298305.1 | mRNA | downstream | 46637 | 17191319 ~ 17239116 (-) | False | vipr1b |
| XM_026938244.2 | mRNA | downstream | 46647 | 17191319 ~ 17239106 (-) | True | vipr1b |
| XM_026938200.2 | mRNA | downstream | 124546 | 17142461 ~ 17161207 (-) | True | nktr |
| XM_034297896.1 | mRNA | upstream | 14145 | 17305155 ~ 17309921 (-) | True | ccdc58 |
| XM_026938088.2 | mRNA | upstream | 25510 | 17316520 ~ 17329657 (-) | True | kpna1 |
| XM_034298202.1 | mRNA | upstream | 73631 | 17364641 ~ 17378007 (-) | False | qtrt2 |
| XM_026938253.2 | mRNA | upstream | 73631 | 17364641 ~ 17378007 (-) | False | qtrt2 |
| XM_026938252.2 | mRNA | upstream | 73631 | 17364641 ~ 17377985 (-) | True | qtrt2 |
| XR_004576994.1 | other | downstream | 46647 | 17185524 ~ 17239106 (-) | False | vipr1b |
| XR_003404146.2 | other | downstream | 146068 | 17116098 ~ 17139685 (-) | False | zbtb47b |
| XR_004576965.1 | other | downstream | 405869 | 16830696 ~ 16879884 (-) | False | oxsr1b |
| XR_004576964.1 | other | downstream | 405870 | 16830696 ~ 16879883 (-) | False | oxsr1b |
| TU393587 | other | downstream | 2219943 | 14965813 ~ 15065810 (-) | False | LOC113541115 |
| TU395488 | other | upstream | 616884 | 17907894 ~ 17908812 (-) | False | LOC113541127 |
| XR_004576970.1 | other | upstream | 618928 | 17909938 ~ 17916556 (-) | False | c22h11orf65 |
| TU395529 | other | upstream | 634065 | 17925075 ~ 17926835 (-) | False | zmp:0000000991 |
| trnay-gua_3 | other | upstream | 1088026 | 18379036 ~ 18379121 (-) | True | trnay-gua_3 |
| trnay-gua_4 | other | upstream | 1088639 | 18379649 ~ 18379734 (-) | True | trnay-gua_4 |
