Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU395113 |
| length | 1125 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 1 |
| gene id | rnf6 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 17535944 ~ 17542387 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU395063 | lncRNA | upstream | 93594 | 17446185 ~ 17447043 (+) | True | G333582 |
| TU395018 | lncRNA | upstream | 177562 | 17362871 ~ 17363075 (+) | True | G333548 |
| TU394762 | lncRNA | upstream | 353962 | 17186129 ~ 17186675 (+) | True | G333360 |
| TU394629 | lncRNA | upstream | 642782 | 16893006 ~ 16897855 (+) | True | G333244 |
| XR_003404172.2 | lncRNA | upstream | 650476 | 16888937 ~ 16890161 (+) | True | LOC113541357 |
| TU395303 | lncRNA | downstream | 125875 | 17667636 ~ 17667844 (+) | True | G333787 |
| TU395307 | lncRNA | downstream | 128655 | 17670416 ~ 17670625 (+) | True | G333791 |
| TU395294 | lncRNA | downstream | 165961 | 17707722 ~ 17712380 (+) | True | G333779 |
| TU395313 | lncRNA | downstream | 199640 | 17741401 ~ 17745040 (+) | False | G333795 |
| TU395312 | lncRNA | downstream | 201517 | 17743278 ~ 17756282 (+) | True | G333795 |
| XM_034298075.1 | mRNA | upstream | 36934 | 17496077 ~ 17503703 (+) | True | gpr12 |
| XM_026938072.2 | mRNA | upstream | 48319 | 17483693 ~ 17492318 (+) | True | usp12a |
| XM_026937820.2 | mRNA | upstream | 74185 | 17450723 ~ 17466452 (+) | False | lnx2a |
| XM_026937819.2 | mRNA | upstream | 74185 | 17452164 ~ 17466452 (+) | True | lnx2a |
| XM_026938140.2 | mRNA | upstream | 105812 | 17432046 ~ 17434825 (+) | True | urad |
| XM_034298181.1 | mRNA | downstream | 2062 | 17543823 ~ 17605193 (+) | True | atp8a2 |
| XM_034298182.1 | mRNA | downstream | 2063 | 17543824 ~ 17605193 (+) | False | atp8a2 |
| XM_034298184.1 | mRNA | downstream | 14731 | 17556492 ~ 17605193 (+) | False | atp8a2 |
| XM_034298183.1 | mRNA | downstream | 15573 | 17557334 ~ 17605193 (+) | False | atp8a2 |
| XM_034298185.1 | mRNA | downstream | 23368 | 17565129 ~ 17605193 (+) | False | atp8a2 |
| TU394792 | other | upstream | 238633 | 17287160 ~ 17302004 (+) | False | G333388 |
| TU394795 | other | upstream | 238940 | 17292031 ~ 17301697 (+) | False | G333388 |
| TU394798 | other | upstream | 240626 | 17285082 ~ 17300011 (+) | True | G333388 |
| TU394801 | other | upstream | 240626 | 17287160 ~ 17300011 (+) | False | G333388 |
| TU394797 | other | upstream | 245583 | 17287160 ~ 17295054 (+) | False | G333388 |
| TU395491 | other | downstream | 445001 | 17986762 ~ 17993014 (+) | True | G333943 |
| XR_004576961.1 | other | downstream | 773595 | 18315356 ~ 18323295 (+) | False | mtfr1 |
| XR_004576962.1 | other | downstream | 773597 | 18315358 ~ 18323295 (+) | False | mtfr1 |
| XR_004576959.1 | other | downstream | 773599 | 18315360 ~ 18323295 (+) | False | mtfr1 |
| XR_004576960.1 | other | downstream | 773922 | 18315683 ~ 18323295 (+) | True | mtfr1 |
