Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU395150 |
| length | 288 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 1 |
| gene id | G333656 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 17389454 ~ 17389741 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU395147 | lncRNA | downstream | 3808 | 17385279 ~ 17385646 (-) | True | G333653 |
| TU395146 | lncRNA | downstream | 5431 | 17383742 ~ 17384023 (-) | True | G333652 |
| TU395144 | lncRNA | downstream | 8218 | 17380855 ~ 17381236 (-) | True | G333650 |
| TU395143 | lncRNA | downstream | 10882 | 17378296 ~ 17378572 (-) | True | G333649 |
| TU394986 | lncRNA | downstream | 87458 | 17290137 ~ 17301996 (-) | False | G333525 |
| TU395151 | lncRNA | upstream | 121 | 17389862 ~ 17390113 (-) | True | G333657 |
| TU395207 | lncRNA | upstream | 152105 | 17541846 ~ 17542352 (-) | True | G333700 |
| TU395479 | lncRNA | upstream | 510098 | 17899839 ~ 17902383 (-) | True | G333932 |
| TU395481 | lncRNA | upstream | 512892 | 17902633 ~ 17902855 (-) | True | G333934 |
| TU395486 | lncRNA | upstream | 516167 | 17905908 ~ 17906806 (-) | True | G333939 |
| XM_034298202.1 | mRNA | downstream | 11447 | 17364641 ~ 17378007 (-) | False | qtrt2 |
| XM_026938253.2 | mRNA | downstream | 11447 | 17364641 ~ 17378007 (-) | False | qtrt2 |
| XM_026938252.2 | mRNA | downstream | 11469 | 17364641 ~ 17377985 (-) | True | qtrt2 |
| XM_026938088.2 | mRNA | downstream | 59797 | 17316520 ~ 17329657 (-) | True | kpna1 |
| XM_034297896.1 | mRNA | downstream | 79533 | 17305155 ~ 17309921 (-) | True | ccdc58 |
| XM_026938211.2 | mRNA | upstream | 914 | 17390655 ~ 17397944 (-) | False | zdhhc23b |
| XM_034298220.1 | mRNA | upstream | 914 | 17390655 ~ 17397925 (-) | False | zdhhc23b |
| XM_034298219.1 | mRNA | upstream | 914 | 17390655 ~ 17397925 (-) | False | zdhhc23b |
| XM_026938214.2 | mRNA | upstream | 914 | 17390655 ~ 17397925 (-) | False | zdhhc23b |
| XM_026938213.2 | mRNA | upstream | 914 | 17390655 ~ 17397925 (-) | True | zdhhc23b |
| XR_004576994.1 | other | downstream | 150348 | 17185524 ~ 17239106 (-) | False | vipr1b |
| XR_003404146.2 | other | downstream | 249769 | 17116098 ~ 17139685 (-) | False | zbtb47b |
| XR_004576965.1 | other | downstream | 509570 | 16830696 ~ 16879884 (-) | False | oxsr1b |
| XR_004576964.1 | other | downstream | 509571 | 16830696 ~ 16879883 (-) | False | oxsr1b |
| TU393587 | other | downstream | 2323644 | 14965813 ~ 15065810 (-) | False | LOC113541115 |
| TU395488 | other | upstream | 518153 | 17907894 ~ 17908812 (-) | False | LOC113541127 |
| XR_004576970.1 | other | upstream | 520197 | 17909938 ~ 17916556 (-) | False | c22h11orf65 |
| TU395529 | other | upstream | 535334 | 17925075 ~ 17926835 (-) | False | zmp:0000000991 |
| trnay-gua_3 | other | upstream | 989295 | 18379036 ~ 18379121 (-) | True | trnay-gua_3 |
| trnay-gua_4 | other | upstream | 989908 | 18379649 ~ 18379734 (-) | True | trnay-gua_4 |
