Item | Value |
---|---|
RNA id | TU395315 |
length | 218 |
lncRNA type | inter_gene |
GC content | 0.39 |
exon number | 1 |
gene id | G333797 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047616.1 |
NCBI id | CM018562.1 |
chromosome length | 21037487 |
location | 17756325 ~ 17756542 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU395312 | lncRNA | upstream | 43 | 17743278 ~ 17756282 (+) | True | G333795 |
TU395313 | lncRNA | upstream | 11285 | 17741401 ~ 17745040 (+) | False | G333795 |
TU395294 | lncRNA | upstream | 43945 | 17707722 ~ 17712380 (+) | True | G333779 |
TU395307 | lncRNA | upstream | 85700 | 17670416 ~ 17670625 (+) | True | G333791 |
TU395303 | lncRNA | upstream | 88481 | 17667636 ~ 17667844 (+) | True | G333787 |
TU395316 | lncRNA | downstream | 16 | 17756558 ~ 17756798 (+) | True | G333798 |
TU395317 | lncRNA | downstream | 1182 | 17757724 ~ 17757929 (+) | True | G333799 |
TU395319 | lncRNA | downstream | 25278 | 17781820 ~ 17796521 (+) | False | pan3 |
TU395321 | lncRNA | downstream | 93253 | 17849795 ~ 17850795 (+) | True | G333801 |
TU395484 | lncRNA | downstream | 148411 | 17904953 ~ 17905225 (+) | True | G333937 |
XM_026938142.2 | mRNA | upstream | 16740 | 17727853 ~ 17739585 (+) | True | atp6v1ab |
XM_026938144.2 | mRNA | upstream | 50207 | 17678898 ~ 17706118 (+) | True | boc |
XM_026938146.2 | mRNA | upstream | 50207 | 17678898 ~ 17706118 (+) | False | boc |
XM_034298054.1 | mRNA | upstream | 102712 | 17636431 ~ 17653613 (+) | False | LOC113541191 |
XM_026937954.2 | mRNA | downstream | 4989 | 17761531 ~ 17782411 (+) | True | pan3 |
XM_026938160.2 | mRNA | downstream | 185886 | 17942428 ~ 17951626 (+) | True | chodl |
XM_034298173.1 | mRNA | downstream | 204446 | 17960988 ~ 17963471 (+) | True | zgc:112408 |
XM_026938188.2 | mRNA | downstream | 216662 | 17973204 ~ 17983420 (+) | True | lipib |
XM_026938136.2 | mRNA | downstream | 331105 | 18087647 ~ 18097915 (+) | True | ythdf3 |
TU394792 | other | upstream | 454321 | 17287160 ~ 17302004 (+) | False | G333388 |
TU394795 | other | upstream | 454628 | 17292031 ~ 17301697 (+) | False | G333388 |
TU394798 | other | upstream | 456314 | 17285082 ~ 17300011 (+) | True | G333388 |
TU394801 | other | upstream | 456314 | 17287160 ~ 17300011 (+) | False | G333388 |
TU394797 | other | upstream | 461271 | 17287160 ~ 17295054 (+) | False | G333388 |
TU395491 | other | downstream | 230220 | 17986762 ~ 17993014 (+) | True | G333943 |
XR_004576961.1 | other | downstream | 558814 | 18315356 ~ 18323295 (+) | False | mtfr1 |
XR_004576962.1 | other | downstream | 558816 | 18315358 ~ 18323295 (+) | False | mtfr1 |
XR_004576959.1 | other | downstream | 558818 | 18315360 ~ 18323295 (+) | False | mtfr1 |
XR_004576960.1 | other | downstream | 559141 | 18315683 ~ 18323295 (+) | True | mtfr1 |