Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU395481 |
| length | 223 |
| lncRNA type | inter_gene |
| GC content | 0.26 |
| exon number | 1 |
| gene id | G333934 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 17902633 ~ 17902855 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU395479 | lncRNA | downstream | 250 | 17899839 ~ 17902383 (-) | True | G333932 |
| TU395207 | lncRNA | downstream | 360281 | 17541846 ~ 17542352 (-) | True | G333700 |
| TU395151 | lncRNA | downstream | 512520 | 17389862 ~ 17390113 (-) | True | G333657 |
| TU395150 | lncRNA | downstream | 512892 | 17389454 ~ 17389741 (-) | True | G333656 |
| TU395147 | lncRNA | downstream | 516987 | 17385279 ~ 17385646 (-) | True | G333653 |
| TU395486 | lncRNA | upstream | 3053 | 17905908 ~ 17906806 (-) | True | G333939 |
| TU395528 | lncRNA | upstream | 21636 | 17924491 ~ 17924789 (-) | True | G333971 |
| TU395616 | lncRNA | upstream | 125720 | 18028575 ~ 18028834 (-) | True | G334038 |
| TU395628 | lncRNA | upstream | 176298 | 18079153 ~ 18079979 (-) | True | G334050 |
| TU395620 | lncRNA | upstream | 191648 | 18094503 ~ 18099286 (-) | True | G334042 |
| XM_026938264.2 | mRNA | downstream | 2955 | 17890350 ~ 17899678 (-) | False | LOC113541342 |
| XM_026938263.2 | mRNA | downstream | 2957 | 17890350 ~ 17899676 (-) | True | LOC113541342 |
| XM_026938101.2 | mRNA | downstream | 12871 | 17885548 ~ 17889762 (-) | True | abhd10b |
| XM_026938100.2 | mRNA | downstream | 19300 | 17880010 ~ 17883333 (-) | True | tagln3b |
| XM_026937912.2 | mRNA | downstream | 23436 | 17876714 ~ 17879197 (-) | True | c1qtnf9 |
| XM_026937923.2 | mRNA | upstream | 4729 | 17907584 ~ 17908742 (-) | True | LOC113541127 |
| XM_026938079.2 | mRNA | upstream | 6469 | 17909324 ~ 17916556 (-) | True | c22h11orf65 |
| XM_026938077.2 | mRNA | upstream | 13229 | 17916084 ~ 17931814 (-) | True | zmp:0000000991 |
| XM_026937815.2 | mRNA | upstream | 81189 | 17984044 ~ 17995146 (-) | True | zgc:112982 |
| XM_026938207.2 | mRNA | upstream | 94812 | 17997667 ~ 18019023 (-) | False | map7d2b |
| XR_004576994.1 | other | downstream | 663527 | 17185524 ~ 17239106 (-) | False | vipr1b |
| XR_003404146.2 | other | downstream | 762948 | 17116098 ~ 17139685 (-) | False | zbtb47b |
| XR_004576965.1 | other | downstream | 1022749 | 16830696 ~ 16879884 (-) | False | oxsr1b |
| XR_004576964.1 | other | downstream | 1022750 | 16830696 ~ 16879883 (-) | False | oxsr1b |
| TU393587 | other | downstream | 2836823 | 14965813 ~ 15065810 (-) | False | LOC113541115 |
| TU395488 | other | upstream | 5039 | 17907894 ~ 17908812 (-) | False | LOC113541127 |
| XR_004576970.1 | other | upstream | 7083 | 17909938 ~ 17916556 (-) | False | c22h11orf65 |
| TU395529 | other | upstream | 22220 | 17925075 ~ 17926835 (-) | False | zmp:0000000991 |
| trnay-gua_3 | other | upstream | 476181 | 18379036 ~ 18379121 (-) | True | trnay-gua_3 |
| trnay-gua_4 | other | upstream | 476794 | 18379649 ~ 18379734 (-) | True | trnay-gua_4 |
