Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU395628 |
| length | 827 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G334050 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 18079153 ~ 18079979 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU395616 | lncRNA | downstream | 50319 | 18028575 ~ 18028834 (-) | True | G334038 |
| TU395528 | lncRNA | downstream | 154364 | 17924491 ~ 17924789 (-) | True | G333971 |
| TU395486 | lncRNA | downstream | 172347 | 17905908 ~ 17906806 (-) | True | G333939 |
| TU395481 | lncRNA | downstream | 176298 | 17902633 ~ 17902855 (-) | True | G333934 |
| TU395479 | lncRNA | downstream | 176770 | 17899839 ~ 17902383 (-) | True | G333932 |
| TU395620 | lncRNA | upstream | 14524 | 18094503 ~ 18099286 (-) | True | G334042 |
| XR_003404169.2 | lncRNA | upstream | 27718 | 18107697 ~ 18109070 (-) | True | LOC113541306 |
| TU395659 | lncRNA | upstream | 61449 | 18141428 ~ 18202900 (-) | True | G334079 |
| TU395660 | lncRNA | upstream | 123092 | 18203071 ~ 18204225 (-) | True | G334080 |
| TU395695 | lncRNA | upstream | 131937 | 18211916 ~ 18212129 (-) | True | G334110 |
| XM_026937833.2 | mRNA | downstream | 1814 | 18029514 ~ 18077339 (-) | True | rps6ka3b |
| XM_026937834.2 | mRNA | downstream | 17073 | 18029514 ~ 18062080 (-) | False | rps6ka3b |
| XM_026937836.2 | mRNA | downstream | 22531 | 18032348 ~ 18056622 (-) | False | rps6ka3b |
| XM_026937832.2 | mRNA | downstream | 22538 | 18029514 ~ 18056615 (-) | False | rps6ka3b |
| XM_026937831.2 | mRNA | downstream | 22549 | 18029514 ~ 18056604 (-) | False | rps6ka3b |
| XM_034297809.1 | mRNA | upstream | 284 | 18080263 ~ 18086234 (-) | True | pdha1b |
| XM_026937838.2 | mRNA | upstream | 229194 | 18309173 ~ 18315257 (-) | True | armc1 |
| XM_026938218.2 | mRNA | upstream | 246116 | 18326095 ~ 18363579 (-) | False | pde7a |
| XM_026938217.2 | mRNA | upstream | 246116 | 18326095 ~ 18363579 (-) | False | pde7a |
| XM_034298174.1 | mRNA | upstream | 246116 | 18326095 ~ 18363579 (-) | False | pde7a |
| TU395529 | other | downstream | 152318 | 17925075 ~ 17926835 (-) | False | zmp:0000000991 |
| XR_004576970.1 | other | downstream | 162597 | 17909938 ~ 17916556 (-) | False | c22h11orf65 |
| TU395488 | other | downstream | 170341 | 17907894 ~ 17908812 (-) | False | LOC113541127 |
| XR_004576994.1 | other | downstream | 840047 | 17185524 ~ 17239106 (-) | False | vipr1b |
| XR_003404146.2 | other | downstream | 939468 | 17116098 ~ 17139685 (-) | False | zbtb47b |
| trnay-gua_3 | other | upstream | 299057 | 18379036 ~ 18379121 (-) | True | trnay-gua_3 |
| trnay-gua_4 | other | upstream | 299670 | 18379649 ~ 18379734 (-) | True | trnay-gua_4 |
| TU395863 | other | upstream | 362376 | 18442355 ~ 18442995 (-) | False | mybl1 |
| TU395862 | other | upstream | 364679 | 18444658 ~ 18520205 (-) | False | mybl1 |
| TU396861 | other | upstream | 1496129 | 19576108 ~ 19578920 (-) | False | nup58 |
