Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU395657 |
| length | 707 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G334078 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 18200395 ~ 18202905 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU395608 | lncRNA | upstream | 91591 | 18085319 ~ 18108804 (+) | True | G334032 |
| TU395604 | lncRNA | upstream | 121025 | 18079151 ~ 18079370 (+) | True | G334028 |
| TU395574 | lncRNA | upstream | 155218 | 18043824 ~ 18045177 (+) | True | G334005 |
| TU395506 | lncRNA | upstream | 173433 | 18021739 ~ 18026962 (+) | True | G333953 |
| TU395521 | lncRNA | upstream | 184801 | 18012927 ~ 18015594 (+) | True | G333966 |
| TU395656 | lncRNA | downstream | 158 | 18203063 ~ 18203680 (+) | True | G334077 |
| TU395716 | lncRNA | downstream | 93738 | 18296643 ~ 18324885 (+) | True | G334120 |
| TU395714 | lncRNA | downstream | 99957 | 18302862 ~ 18324824 (+) | False | G334120 |
| TU395829 | lncRNA | downstream | 232816 | 18435721 ~ 18437406 (+) | True | G334209 |
| TU395830 | lncRNA | downstream | 236244 | 18439149 ~ 18439446 (+) | True | G334210 |
| XM_026938136.2 | mRNA | upstream | 102480 | 18087647 ~ 18097915 (+) | True | ythdf3 |
| XM_026938188.2 | mRNA | upstream | 216975 | 17973204 ~ 17983420 (+) | True | lipib |
| XM_034298173.1 | mRNA | upstream | 236924 | 17960988 ~ 17963471 (+) | True | zgc:112408 |
| XM_026938160.2 | mRNA | upstream | 248769 | 17942428 ~ 17951626 (+) | True | chodl |
| XM_026937954.2 | mRNA | upstream | 417984 | 17761531 ~ 17782411 (+) | True | pan3 |
| XM_026937924.2 | mRNA | downstream | 11958 | 18214863 ~ 18217206 (+) | True | bhlhe22 |
| XM_034298031.1 | mRNA | downstream | 112449 | 18315354 ~ 18323295 (+) | False | mtfr1 |
| XM_026938225.2 | mRNA | downstream | 169817 | 18372722 ~ 18378196 (+) | True | dnajc5b |
| XM_026938222.2 | mRNA | downstream | 177386 | 18380291 ~ 18390865 (+) | True | trim55b |
| XM_026938223.2 | mRNA | downstream | 177540 | 18380445 ~ 18390865 (+) | False | trim55b |
| TU395491 | other | upstream | 207381 | 17986762 ~ 17993014 (+) | True | G333943 |
| TU394795 | other | upstream | 898698 | 17292031 ~ 17301697 (+) | False | G333388 |
| TU394801 | other | upstream | 900384 | 17287160 ~ 17300011 (+) | False | G333388 |
| TU394797 | other | upstream | 905341 | 17287160 ~ 17295054 (+) | False | G333388 |
| XR_004576961.1 | other | downstream | 112451 | 18315356 ~ 18323295 (+) | False | mtfr1 |
| XR_004576962.1 | other | downstream | 112453 | 18315358 ~ 18323295 (+) | False | mtfr1 |
| XR_004576959.1 | other | downstream | 112455 | 18315360 ~ 18323295 (+) | False | mtfr1 |
| XR_004576960.1 | other | downstream | 112778 | 18315683 ~ 18323295 (+) | True | mtfr1 |
| trnaa-agc_15 | other | downstream | 176397 | 18379302 ~ 18379374 (+) | True | trnaa-agc_15 |
