Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU395716 |
| length | 739 |
| lncRNA type | sense_over |
| GC content | 0.33 |
| exon number | 2 |
| gene id | G334120 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 18296643 ~ 18324885 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU395656 | lncRNA | upstream | 92963 | 18203063 ~ 18203680 (+) | True | G334077 |
| TU395657 | lncRNA | upstream | 93738 | 18200395 ~ 18202905 (+) | True | G334078 |
| TU395608 | lncRNA | upstream | 187839 | 18085319 ~ 18108804 (+) | True | G334032 |
| TU395604 | lncRNA | upstream | 217273 | 18079151 ~ 18079370 (+) | True | G334028 |
| TU395574 | lncRNA | upstream | 251466 | 18043824 ~ 18045177 (+) | True | G334005 |
| TU395829 | lncRNA | downstream | 110836 | 18435721 ~ 18437406 (+) | True | G334209 |
| TU395830 | lncRNA | downstream | 114264 | 18439149 ~ 18439446 (+) | True | G334210 |
| TU395831 | lncRNA | downstream | 115370 | 18440255 ~ 18440656 (+) | True | G334211 |
| TU395842 | lncRNA | downstream | 149799 | 18474684 ~ 18478739 (+) | False | mcmdc2 |
| TU395840 | lncRNA | downstream | 175898 | 18500783 ~ 18530907 (+) | True | G334219 |
| XM_026937924.2 | mRNA | upstream | 79437 | 18214863 ~ 18217206 (+) | True | bhlhe22 |
| XM_026938136.2 | mRNA | upstream | 198728 | 18087647 ~ 18097915 (+) | True | ythdf3 |
| XM_026938188.2 | mRNA | upstream | 313223 | 17973204 ~ 17983420 (+) | True | lipib |
| XM_034298173.1 | mRNA | upstream | 333172 | 17960988 ~ 17963471 (+) | True | zgc:112408 |
| XM_026938160.2 | mRNA | upstream | 345017 | 17942428 ~ 17951626 (+) | True | chodl |
| XM_026938225.2 | mRNA | downstream | 47837 | 18372722 ~ 18378196 (+) | True | dnajc5b |
| XM_026938222.2 | mRNA | downstream | 55406 | 18380291 ~ 18390865 (+) | True | trim55b |
| XM_026938223.2 | mRNA | downstream | 55560 | 18380445 ~ 18390865 (+) | False | trim55b |
| XM_034298263.1 | mRNA | downstream | 71342 | 18396227 ~ 18432150 (+) | True | si:dkey-97a13.12 |
| XM_026937814.2 | mRNA | downstream | 85751 | 18410636 ~ 18432150 (+) | False | si:dkey-97a13.12 |
| TU395491 | other | upstream | 303629 | 17986762 ~ 17993014 (+) | True | G333943 |
| TU394795 | other | upstream | 994946 | 17292031 ~ 17301697 (+) | False | G333388 |
| TU394801 | other | upstream | 996632 | 17287160 ~ 17300011 (+) | False | G333388 |
| TU394797 | other | upstream | 1001589 | 17287160 ~ 17295054 (+) | False | G333388 |
| trnaa-agc_15 | other | downstream | 54417 | 18379302 ~ 18379374 (+) | True | trnaa-agc_15 |
| trnaa-agc_16 | other | downstream | 55057 | 18379942 ~ 18380014 (+) | True | trnaa-agc_16 |
| TU396015 | other | downstream | 368264 | 18693149 ~ 18717953 (+) | True | G334373 |
| TU396386 | other | downstream | 1014321 | 19339206 ~ 19360737 (+) | False | dap |
| TU396388 | other | downstream | 1014321 | 19339206 ~ 19427936 (+) | False | dap |
