Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU395831 |
| length | 402 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G334211 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 18440255 ~ 18440656 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU395830 | lncRNA | upstream | 809 | 18439149 ~ 18439446 (+) | True | G334210 |
| TU395829 | lncRNA | upstream | 2849 | 18435721 ~ 18437406 (+) | True | G334209 |
| TU395716 | lncRNA | upstream | 115370 | 18296643 ~ 18324885 (+) | True | G334120 |
| TU395714 | lncRNA | upstream | 115431 | 18302862 ~ 18324824 (+) | False | G334120 |
| TU395656 | lncRNA | upstream | 236575 | 18203063 ~ 18203680 (+) | True | G334077 |
| TU395842 | lncRNA | downstream | 34028 | 18474684 ~ 18478739 (+) | False | mcmdc2 |
| TU395840 | lncRNA | downstream | 60127 | 18500783 ~ 18530907 (+) | True | G334219 |
| TU395839 | lncRNA | downstream | 60852 | 18501508 ~ 18530907 (+) | False | G334219 |
| TU395933 | lncRNA | downstream | 102706 | 18543362 ~ 18581969 (+) | False | LOC113541128 |
| XR_003404150.2 | lncRNA | downstream | 102734 | 18543390 ~ 18681823 (+) | False | LOC113541128 |
| XM_034298263.1 | mRNA | upstream | 8105 | 18396227 ~ 18432150 (+) | True | si:dkey-97a13.12 |
| XM_026937814.2 | mRNA | upstream | 8105 | 18410636 ~ 18432150 (+) | False | si:dkey-97a13.12 |
| XM_026937813.2 | mRNA | upstream | 16695 | 18420986 ~ 18423560 (+) | True | rrs1 |
| XM_026938222.2 | mRNA | upstream | 49390 | 18380291 ~ 18390865 (+) | True | trim55b |
| XM_026938223.2 | mRNA | upstream | 49390 | 18380445 ~ 18390865 (+) | False | trim55b |
| XM_026938083.2 | mRNA | downstream | 12451 | 18453107 ~ 18467245 (+) | True | sgk3 |
| XM_026938084.2 | mRNA | downstream | 12730 | 18453386 ~ 18467245 (+) | False | sgk3 |
| XM_026938085.2 | mRNA | downstream | 13933 | 18454589 ~ 18467245 (+) | False | sgk3 |
| XM_034298210.1 | mRNA | downstream | 27222 | 18467878 ~ 18474659 (+) | False | mcmdc2 |
| XM_034298211.1 | mRNA | downstream | 27366 | 18468022 ~ 18486009 (+) | True | mcmdc2 |
| trnaa-agc_16 | other | upstream | 60241 | 18379942 ~ 18380014 (+) | True | trnaa-agc_16 |
| trnaa-agc_15 | other | upstream | 60881 | 18379302 ~ 18379374 (+) | True | trnaa-agc_15 |
| XR_004576962.1 | other | upstream | 116960 | 18315358 ~ 18323295 (+) | False | mtfr1 |
| TU396015 | other | downstream | 252493 | 18693149 ~ 18717953 (+) | True | G334373 |
| TU396386 | other | downstream | 898550 | 19339206 ~ 19360737 (+) | False | dap |
| TU396388 | other | downstream | 898550 | 19339206 ~ 19427936 (+) | False | dap |
| TU396389 | other | downstream | 898550 | 19339206 ~ 19360737 (+) | False | dap |
| TU396390 | other | downstream | 898550 | 19339206 ~ 19360737 (+) | False | dap |
