Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU395840 |
| length | 731 |
| lncRNA type | read_through |
| GC content | 0.46 |
| exon number | 3 |
| gene id | G334219 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 18500783 ~ 18530907 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU395842 | lncRNA | upstream | 22044 | 18474684 ~ 18478739 (+) | False | mcmdc2 |
| TU395831 | lncRNA | upstream | 60127 | 18440255 ~ 18440656 (+) | True | G334211 |
| TU395830 | lncRNA | upstream | 61337 | 18439149 ~ 18439446 (+) | True | G334210 |
| TU395829 | lncRNA | upstream | 63377 | 18435721 ~ 18437406 (+) | True | G334209 |
| TU395716 | lncRNA | upstream | 175898 | 18296643 ~ 18324885 (+) | True | G334120 |
| TU395933 | lncRNA | downstream | 12455 | 18543362 ~ 18581969 (+) | False | LOC113541128 |
| XR_003404150.2 | lncRNA | downstream | 12483 | 18543390 ~ 18681823 (+) | False | LOC113541128 |
| XR_004576990.1 | lncRNA | downstream | 12483 | 18543390 ~ 18680498 (+) | False | LOC113541128 |
| XR_004576989.1 | lncRNA | downstream | 12483 | 18543390 ~ 18584755 (+) | True | LOC113541128 |
| TU395987 | lncRNA | downstream | 147968 | 18678875 ~ 18738178 (+) | True | G334345 |
| XM_034298211.1 | mRNA | upstream | 14774 | 18468022 ~ 18486009 (+) | True | mcmdc2 |
| XM_034298210.1 | mRNA | upstream | 26124 | 18467878 ~ 18474659 (+) | False | mcmdc2 |
| XM_034298209.1 | mRNA | upstream | 26124 | 18468026 ~ 18474659 (+) | False | mcmdc2 |
| XM_034298208.1 | mRNA | upstream | 26126 | 18468022 ~ 18474657 (+) | False | mcmdc2 |
| XM_026938083.2 | mRNA | upstream | 33538 | 18453107 ~ 18467245 (+) | True | sgk3 |
| XM_026938175.2 | mRNA | downstream | 3371 | 18534278 ~ 18542760 (+) | False | hnf4g |
| XM_026938177.2 | mRNA | downstream | 3374 | 18534281 ~ 18542356 (+) | False | hnf4g |
| XM_034298302.1 | mRNA | downstream | 181141 | 18712048 ~ 18733080 (+) | False | LOC117595806 |
| XM_034298301.1 | mRNA | downstream | 185403 | 18716310 ~ 18733080 (+) | False | LOC117595806 |
| XM_034298300.1 | mRNA | downstream | 185403 | 18716310 ~ 18733080 (+) | False | LOC117595806 |
| trnaa-agc_16 | other | upstream | 120769 | 18379942 ~ 18380014 (+) | True | trnaa-agc_16 |
| trnaa-agc_15 | other | upstream | 121409 | 18379302 ~ 18379374 (+) | True | trnaa-agc_15 |
| XR_004576962.1 | other | upstream | 177488 | 18315358 ~ 18323295 (+) | False | mtfr1 |
| TU396015 | other | downstream | 162242 | 18693149 ~ 18717953 (+) | True | G334373 |
| TU396386 | other | downstream | 808299 | 19339206 ~ 19360737 (+) | False | dap |
| TU396388 | other | downstream | 808299 | 19339206 ~ 19427936 (+) | False | dap |
| TU396389 | other | downstream | 808299 | 19339206 ~ 19360737 (+) | False | dap |
| TU396390 | other | downstream | 808299 | 19339206 ~ 19360737 (+) | False | dap |
