Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_003404164.2 |
| length | 675 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 7 |
| gene id | LOC113541286 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 18474666 ~ 18478793 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU395875 | lncRNA | downstream | 10112 | 18461956 ~ 18464554 (-) | True | G334248 |
| TU395876 | lncRNA | downstream | 10112 | 18461956 ~ 18464554 (-) | False | G334248 |
| TU395861 | lncRNA | downstream | 38144 | 18435758 ~ 18436522 (-) | True | G334235 |
| TU395807 | lncRNA | downstream | 47591 | 18388853 ~ 18427075 (-) | True | G334191 |
| TU395695 | lncRNA | downstream | 262537 | 18211916 ~ 18212129 (-) | True | G334110 |
| TU396070 | lncRNA | upstream | 103690 | 18582473 ~ 18583025 (-) | True | G334425 |
| TU396071 | lncRNA | upstream | 104819 | 18583602 ~ 18584312 (-) | True | G334426 |
| TU396072 | lncRNA | upstream | 105980 | 18584763 ~ 18585235 (-) | True | G334427 |
| TU396115 | lncRNA | upstream | 270612 | 18749395 ~ 18749913 (-) | True | G334470 |
| TU396116 | lncRNA | upstream | 277087 | 18755870 ~ 18759552 (-) | True | G334471 |
| XM_034298307.1 | mRNA | downstream | 25439 | 18437514 ~ 18449227 (-) | False | mybl1 |
| XM_026938290.2 | mRNA | downstream | 25439 | 18437514 ~ 18449227 (-) | True | mybl1 |
| XM_026938226.2 | mRNA | downstream | 81688 | 18391371 ~ 18392978 (-) | True | crhb |
| XM_026938220.2 | mRNA | downstream | 128510 | 18326095 ~ 18346156 (-) | False | pde7a |
| XM_026938173.2 | mRNA | upstream | 896 | 18479679 ~ 18482400 (-) | True | LOC113541285 |
| XM_034298212.1 | mRNA | upstream | 4604 | 18483387 ~ 18490581 (-) | False | ppp1r42 |
| XM_026938172.2 | mRNA | upstream | 4604 | 18483387 ~ 18490581 (-) | True | ppp1r42 |
| XM_026937841.2 | mRNA | upstream | 17380 | 18496163 ~ 18502082 (-) | False | cops5 |
| XM_026937840.2 | mRNA | upstream | 17380 | 18496163 ~ 18502057 (-) | True | cops5 |
| TU395863 | other | downstream | 31671 | 18442355 ~ 18442995 (-) | False | mybl1 |
| trnay-gua_4 | other | downstream | 94932 | 18379649 ~ 18379734 (-) | True | trnay-gua_4 |
| trnay-gua_3 | other | downstream | 95545 | 18379036 ~ 18379121 (-) | True | trnay-gua_3 |
| TU395529 | other | downstream | 547831 | 17925075 ~ 17926835 (-) | False | zmp:0000000991 |
| XR_004576970.1 | other | downstream | 558110 | 17909938 ~ 17916556 (-) | False | c22h11orf65 |
| TU396861 | other | upstream | 1097325 | 19576108 ~ 19578920 (-) | False | nup58 |
| TU396884 | other | upstream | 1121944 | 19600727 ~ 19603693 (-) | True | G335165 |
| TU397303 | other | upstream | 1700629 | 20179412 ~ 20182412 (-) | True | G335523 |
| TU397559 | other | upstream | 1763737 | 20242520 ~ 20246278 (-) | False | cops9 |
| TU397560 | other | upstream | 1767783 | 20246566 ~ 20248461 (-) | False | otos |
