Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU396070 |
| length | 553 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G334425 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 18582473 ~ 18583025 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003404163.2 | lncRNA | downstream | 103680 | 18474666 ~ 18478793 (-) | True | LOC113541286 |
| XR_003404164.2 | lncRNA | downstream | 103690 | 18474666 ~ 18478783 (-) | False | LOC113541286 |
| TU395888 | lncRNA | downstream | 103715 | 18474680 ~ 18478758 (-) | False | LOC113541286 |
| TU395889 | lncRNA | downstream | 103715 | 18474680 ~ 18478758 (-) | False | LOC113541286 |
| TU395890 | lncRNA | downstream | 103715 | 18474680 ~ 18478758 (-) | False | LOC113541286 |
| TU396071 | lncRNA | upstream | 577 | 18583602 ~ 18584312 (-) | True | G334426 |
| TU396072 | lncRNA | upstream | 1738 | 18584763 ~ 18585235 (-) | True | G334427 |
| TU396115 | lncRNA | upstream | 166370 | 18749395 ~ 18749913 (-) | True | G334470 |
| TU396116 | lncRNA | upstream | 172845 | 18755870 ~ 18759552 (-) | True | G334471 |
| TU396112 | lncRNA | upstream | 202467 | 18785492 ~ 18789747 (-) | True | G334467 |
| XM_026937841.2 | mRNA | downstream | 80391 | 18496163 ~ 18502082 (-) | False | cops5 |
| XM_026937840.2 | mRNA | downstream | 80416 | 18496163 ~ 18502057 (-) | True | cops5 |
| XM_034298212.1 | mRNA | downstream | 91892 | 18483387 ~ 18490581 (-) | False | ppp1r42 |
| XM_026938172.2 | mRNA | downstream | 91892 | 18483387 ~ 18490581 (-) | True | ppp1r42 |
| XM_026938173.2 | mRNA | downstream | 100073 | 18479679 ~ 18482400 (-) | True | LOC113541285 |
| XM_026938168.2 | mRNA | upstream | 225569 | 18808594 ~ 18816074 (-) | True | pex2 |
| XM_026938262.2 | mRNA | upstream | 422473 | 19005498 ~ 19008927 (-) | False | pkia |
| XM_026938261.2 | mRNA | upstream | 422473 | 19005498 ~ 19008927 (-) | False | pkia |
| XM_026938260.2 | mRNA | upstream | 422474 | 19005499 ~ 19015855 (-) | False | pkia |
| XM_034297799.1 | mRNA | upstream | 422474 | 19005499 ~ 19008689 (-) | True | pkia |
| TU395862 | other | downstream | 62268 | 18444658 ~ 18520205 (-) | False | mybl1 |
| TU395863 | other | downstream | 139478 | 18442355 ~ 18442995 (-) | False | mybl1 |
| trnay-gua_4 | other | downstream | 202739 | 18379649 ~ 18379734 (-) | True | trnay-gua_4 |
| trnay-gua_3 | other | downstream | 203352 | 18379036 ~ 18379121 (-) | True | trnay-gua_3 |
| TU395529 | other | downstream | 655638 | 17925075 ~ 17926835 (-) | False | zmp:0000000991 |
| TU396861 | other | upstream | 993083 | 19576108 ~ 19578920 (-) | False | nup58 |
| TU396884 | other | upstream | 1017702 | 19600727 ~ 19603693 (-) | True | G335165 |
| TU397303 | other | upstream | 1596387 | 20179412 ~ 20182412 (-) | True | G335523 |
| TU397559 | other | upstream | 1659495 | 20242520 ~ 20246278 (-) | False | cops9 |
| TU397560 | other | upstream | 1663541 | 20246566 ~ 20248461 (-) | False | otos |
