Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU396220 |
| length | 212 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G334574 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 18932629 ~ 18932840 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU396216 | lncRNA | downstream | 2190 | 18929979 ~ 18930439 (-) | True | G334570 |
| TU396112 | lncRNA | downstream | 142882 | 18785492 ~ 18789747 (-) | True | G334467 |
| TU396116 | lncRNA | downstream | 173077 | 18755870 ~ 18759552 (-) | True | G334471 |
| TU396115 | lncRNA | downstream | 182716 | 18749395 ~ 18749913 (-) | True | G334470 |
| TU396072 | lncRNA | downstream | 347394 | 18584763 ~ 18585235 (-) | True | G334427 |
| TU396248 | lncRNA | upstream | 28007 | 18960847 ~ 18961053 (-) | True | G334602 |
| TU396268 | lncRNA | upstream | 72682 | 19005522 ~ 19015784 (-) | False | pkia |
| XR_004576971.1 | lncRNA | upstream | 137498 | 19070338 ~ 19075266 (-) | True | LOC117595792 |
| TU396808 | lncRNA | upstream | 385019 | 19317859 ~ 19360738 (-) | True | G335099 |
| TU396812 | lncRNA | upstream | 426717 | 19359557 ~ 19404889 (-) | True | G335103 |
| XM_026938168.2 | mRNA | downstream | 116555 | 18808594 ~ 18816074 (-) | True | pex2 |
| XM_026937841.2 | mRNA | downstream | 430547 | 18496163 ~ 18502082 (-) | False | cops5 |
| XM_026937840.2 | mRNA | downstream | 430572 | 18496163 ~ 18502057 (-) | True | cops5 |
| XM_034298212.1 | mRNA | downstream | 442048 | 18483387 ~ 18490581 (-) | False | ppp1r42 |
| XM_026938262.2 | mRNA | upstream | 72658 | 19005498 ~ 19008927 (-) | False | pkia |
| XM_026938261.2 | mRNA | upstream | 72658 | 19005498 ~ 19008927 (-) | False | pkia |
| XM_026938260.2 | mRNA | upstream | 72659 | 19005499 ~ 19015855 (-) | False | pkia |
| XM_034297799.1 | mRNA | upstream | 72659 | 19005499 ~ 19008689 (-) | True | pkia |
| XM_026937911.2 | mRNA | upstream | 430559 | 19363399 ~ 19377873 (-) | True | ankrd33ba |
| TU395862 | other | downstream | 412424 | 18444658 ~ 18520205 (-) | False | mybl1 |
| TU395863 | other | downstream | 489634 | 18442355 ~ 18442995 (-) | False | mybl1 |
| trnay-gua_4 | other | downstream | 552895 | 18379649 ~ 18379734 (-) | True | trnay-gua_4 |
| trnay-gua_3 | other | downstream | 553508 | 18379036 ~ 18379121 (-) | True | trnay-gua_3 |
| TU395529 | other | downstream | 1005794 | 17925075 ~ 17926835 (-) | False | zmp:0000000991 |
| TU396861 | other | upstream | 643268 | 19576108 ~ 19578920 (-) | False | nup58 |
| TU396884 | other | upstream | 667887 | 19600727 ~ 19603693 (-) | True | G335165 |
| TU397303 | other | upstream | 1246572 | 20179412 ~ 20182412 (-) | True | G335523 |
| TU397559 | other | upstream | 1309680 | 20242520 ~ 20246278 (-) | False | cops9 |
| TU397560 | other | upstream | 1313726 | 20246566 ~ 20248461 (-) | False | otos |
