Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU396392 |
| length | 1179 |
| RNA type | TUCP |
| GC content | 0.49 |
| exon number | 5 |
| gene id | dap |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 19317857 ~ 19427936 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU396221 | lncRNA | upstream | 405955 | 18933049 ~ 18933251 (+) | True | G334575 |
| TU396219 | lncRNA | upstream | 406496 | 18932502 ~ 18932710 (+) | True | G334573 |
| TU396029 | lncRNA | upstream | 485203 | 18761089 ~ 18854003 (+) | True | G334386 |
| TU396027 | lncRNA | upstream | 591729 | 18722416 ~ 18747477 (+) | False | LOC117595806 |
| XR_004576958.1 | lncRNA | downstream | 93429 | 19521365 ~ 19522260 (+) | True | LOC117595782 |
| TU396487 | lncRNA | downstream | 133166 | 19561102 ~ 19589060 (+) | True | G334806 |
| TU396561 | lncRNA | downstream | 208932 | 19636868 ~ 19703804 (+) | False | cip2a |
| TU396588 | lncRNA | downstream | 276749 | 19704685 ~ 19707006 (+) | True | G334888 |
| TU396939 | lncRNA | downstream | 338534 | 19766470 ~ 19766826 (+) | True | G335214 |
| XM_034298229.1 | mRNA | upstream | 2556 | 19335026 ~ 19336650 (+) | True | LOC117595802 |
| XM_034297842.1 | mRNA | upstream | 3926 | 19332174 ~ 19335280 (+) | True | LOC117595764 |
| XM_026938092.2 | mRNA | upstream | 11081 | 19144343 ~ 19328125 (+) | False | ctnnd2a |
| XM_026938093.2 | mRNA | upstream | 11081 | 19187055 ~ 19328125 (+) | False | ctnnd2a |
| XM_034298154.1 | mRNA | upstream | 14871 | 19060889 ~ 19324335 (+) | False | ctnnd2a |
| XM_026938115.2 | mRNA | downstream | 1832 | 19429768 ~ 19436760 (+) | True | arxa |
| XM_026938116.2 | mRNA | downstream | 1832 | 19429768 ~ 19435547 (+) | False | arxa |
| XM_026938288.2 | mRNA | downstream | 70366 | 19498302 ~ 19506536 (+) | False | pcyt1ba |
| XM_026938285.2 | mRNA | downstream | 70367 | 19498303 ~ 19506536 (+) | True | pcyt1ba |
| XM_034298283.1 | mRNA | downstream | 151374 | 19579310 ~ 19593452 (+) | True | mtmr6 |
| TU396015 | other | upstream | 621253 | 18693149 ~ 18717953 (+) | True | G334373 |
| trnaa-agc_16 | other | upstream | 959192 | 18379942 ~ 18380014 (+) | True | trnaa-agc_16 |
| trnaa-agc_15 | other | upstream | 959832 | 18379302 ~ 18379374 (+) | True | trnaa-agc_15 |
| XR_004576959.1 | other | upstream | 1015911 | 18315360 ~ 18323295 (+) | False | mtfr1 |
| TU396524 | other | downstream | 148175 | 19576111 ~ 19577073 (+) | True | G334838 |
| TU396585 | other | downstream | 250545 | 19678481 ~ 19683870 (+) | True | si:ch73-264p11.1 |
| TU396584 | other | downstream | 252061 | 19679997 ~ 19683870 (+) | False | si:ch73-264p11.1 |
| TU396960 | other | downstream | 360647 | 19788583 ~ 19789058 (+) | True | G335231 |
| TU397154 | other | downstream | 732464 | 20160400 ~ 20163106 (+) | False | ccl20b |
