Item | Value |
---|---|
RNA id | TU396394 |
length | 359 |
lncRNA type | read_through |
GC content | 0.38 |
exon number | 2 |
gene id | dap |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047616.1 |
NCBI id | CM018562.1 |
chromosome length | 21037487 |
location | 19317857 ~ 19427936 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU396221 | lncRNA | upstream | 384606 | 18933049 ~ 18933251 (+) | True | G334575 |
TU396219 | lncRNA | upstream | 385147 | 18932502 ~ 18932710 (+) | True | G334573 |
TU396029 | lncRNA | upstream | 463854 | 18761089 ~ 18854003 (+) | True | G334386 |
TU396027 | lncRNA | upstream | 570380 | 18722416 ~ 18747477 (+) | False | LOC117595806 |
TU396028 | lncRNA | upstream | 570380 | 18743018 ~ 18747477 (+) | True | LOC117595806 |
XR_004576958.1 | lncRNA | downstream | 160628 | 19521365 ~ 19522260 (+) | True | LOC117595782 |
TU396487 | lncRNA | downstream | 200365 | 19561102 ~ 19589060 (+) | True | G334806 |
TU396561 | lncRNA | downstream | 276131 | 19636868 ~ 19703804 (+) | False | cip2a |
TU396588 | lncRNA | downstream | 343948 | 19704685 ~ 19707006 (+) | True | G334888 |
TU396939 | lncRNA | downstream | 405733 | 19766470 ~ 19766826 (+) | True | G335214 |
XM_026937802.2 | mRNA | upstream | 284196 | 19021006 ~ 19033661 (+) | False | zc2hc1a |
XM_026937801.2 | mRNA | upstream | 284196 | 19021007 ~ 19033661 (+) | True | zc2hc1a |
XM_034298157.1 | mRNA | upstream | 386585 | 18816234 ~ 18931272 (+) | False | LOC113541280 |
XM_034298158.1 | mRNA | upstream | 386585 | 18816236 ~ 18931272 (+) | False | LOC113541280 |
XM_034298155.1 | mRNA | upstream | 386585 | 18816236 ~ 18931272 (+) | False | LOC113541280 |
XM_026938081.2 | mRNA | downstream | 31236 | 19391973 ~ 19395890 (+) | True | ndufb4 |
XM_026938115.2 | mRNA | downstream | 69031 | 19429768 ~ 19436760 (+) | True | arxa |
XM_026938116.2 | mRNA | downstream | 69031 | 19429768 ~ 19435547 (+) | False | arxa |
XM_026938288.2 | mRNA | downstream | 137565 | 19498302 ~ 19506536 (+) | False | pcyt1ba |
XM_026938285.2 | mRNA | downstream | 137566 | 19498303 ~ 19506536 (+) | True | pcyt1ba |
TU396015 | other | upstream | 599904 | 18693149 ~ 18717953 (+) | True | G334373 |
trnaa-agc_16 | other | upstream | 937843 | 18379942 ~ 18380014 (+) | True | trnaa-agc_16 |
trnaa-agc_15 | other | upstream | 938483 | 18379302 ~ 18379374 (+) | True | trnaa-agc_15 |
XR_004576959.1 | other | upstream | 994562 | 18315360 ~ 18323295 (+) | False | mtfr1 |
TU396524 | other | downstream | 215374 | 19576111 ~ 19577073 (+) | True | G334838 |
TU396585 | other | downstream | 317744 | 19678481 ~ 19683870 (+) | True | si:ch73-264p11.1 |
TU396584 | other | downstream | 319260 | 19679997 ~ 19683870 (+) | False | si:ch73-264p11.1 |
TU396960 | other | downstream | 427846 | 19788583 ~ 19789058 (+) | True | G335231 |
TU397154 | other | downstream | 799663 | 20160400 ~ 20163106 (+) | False | ccl20b |