Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU396524 |
| length | 320 |
| RNA type | TUCP |
| GC content | 0.68 |
| exon number | 2 |
| gene id | G334838 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 19576111 ~ 19577073 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004576958.1 | lncRNA | upstream | 53851 | 19521365 ~ 19522260 (+) | True | LOC117595782 |
| TU396394 | lncRNA | upstream | 215374 | 19317857 ~ 19360737 (+) | False | dap |
| TU396400 | lncRNA | upstream | 215374 | 19317857 ~ 19360737 (+) | False | dap |
| TU396406 | lncRNA | upstream | 224359 | 19345889 ~ 19351752 (+) | True | G334733 |
| TU396221 | lncRNA | upstream | 642860 | 18933049 ~ 18933251 (+) | True | G334575 |
| TU396561 | lncRNA | downstream | 59795 | 19636868 ~ 19703804 (+) | False | cip2a |
| TU396588 | lncRNA | downstream | 127612 | 19704685 ~ 19707006 (+) | True | G334888 |
| TU396939 | lncRNA | downstream | 189397 | 19766470 ~ 19766826 (+) | True | G335214 |
| TU396940 | lncRNA | downstream | 190390 | 19767463 ~ 19768343 (+) | True | G335215 |
| TU396972 | lncRNA | downstream | 247630 | 19824703 ~ 19824911 (+) | True | G335243 |
| XM_026938288.2 | mRNA | upstream | 69575 | 19498302 ~ 19506536 (+) | False | pcyt1ba |
| XM_026938285.2 | mRNA | upstream | 69575 | 19498303 ~ 19506536 (+) | True | pcyt1ba |
| XM_026938115.2 | mRNA | upstream | 139351 | 19429768 ~ 19436760 (+) | True | arxa |
| XM_026938116.2 | mRNA | upstream | 140564 | 19429768 ~ 19435547 (+) | False | arxa |
| XM_026938081.2 | mRNA | upstream | 180221 | 19391973 ~ 19395890 (+) | True | ndufb4 |
| XM_034298283.1 | mRNA | downstream | 2237 | 19579310 ~ 19593452 (+) | True | mtmr6 |
| XM_026937824.2 | mRNA | downstream | 23492 | 19600565 ~ 19603770 (+) | True | amer2 |
| XM_026938183.2 | mRNA | downstream | 101431 | 19678504 ~ 19683656 (+) | False | si:ch73-264p11.1 |
| XM_034298169.1 | mRNA | downstream | 102977 | 19680050 ~ 19683656 (+) | False | si:ch73-264p11.1 |
| XM_034297890.1 | mRNA | downstream | 111957 | 19689030 ~ 19703771 (+) | False | cip2a |
| TU396388 | other | upstream | 148175 | 19339206 ~ 19427936 (+) | False | dap |
| TU396391 | other | upstream | 148175 | 19339206 ~ 19427936 (+) | False | dap |
| TU396392 | other | upstream | 148175 | 19339206 ~ 19427936 (+) | False | dap |
| TU396397 | other | upstream | 148175 | 19339206 ~ 19427936 (+) | False | dap |
| TU396398 | other | upstream | 148175 | 19339206 ~ 19427936 (+) | False | dap |
| TU396585 | other | downstream | 101408 | 19678481 ~ 19683870 (+) | True | si:ch73-264p11.1 |
| TU396584 | other | downstream | 102924 | 19679997 ~ 19683870 (+) | False | si:ch73-264p11.1 |
| TU396960 | other | downstream | 211510 | 19788583 ~ 19789058 (+) | True | G335231 |
| TU397154 | other | downstream | 583327 | 20160400 ~ 20163106 (+) | False | ccl20b |
| TU397368 | other | downstream | 697047 | 20274120 ~ 20275691 (+) | False | lrrc34 |
