RNA id: TCONS_00008065


Basic Information

Item Value
RNA id TCONS_00008065
length 648
RNA type mRNA
GC content 0.42
exon number 3
gene id XLOC_004209
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 31144720 ~ 31146808 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGTGCGGTGAGCCCCGAGGAAGAATGAAAAGCTGTGGAATAATACAGTCAGCGTTTTACTATGTGAGATATTTTTGTAATCTTCCTTGTTAAGATGTGTCCATACTTTAccctttttatagttttatacttACTTAATATGCCTGACGAATCATTCGGCGAGATGTTCACTTCGATGATGAGCGTGAATCAGACTGTTTCTGCAGAAAGAAAACTCATCGATcacttaataatatatattgaacACGAAGCACAAAGACTGGAAGATATTAAAAGGTTCTTTTCGAGAGTCACATCATTGCATGATGGGATGTACAACAAGCCATCAGATCCCATAGCCAATCCAATTGCTGCATTCAAACTGGTCAAAAGACTTAAATCCGAATGGTTGAATGTTGTCCATAGCACTGAAGCTGAAGAAAACATTAAAGTCCTTAGGGAGGACTACAGGAGGATGGAAAGCAGTTTGCCCAATCTGGAGGACCTTCGGGGGGCGGCGCAAGGGCTGATGAGACTTCAGGATGTGTACAATCTGCGCGTAGAGAGCCTTGTGCGAGGTCACTTCCAGCAAATCACTGATCCTGTTGACTTTTACAAACTCCCTGTGTCCGATATGCTCTCTGGGGATGATTGCTTTCTTGTTGGAAAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000172781

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008053 lncRNA downstream 779915 30361628 ~ 30364805 (-) True XLOC_004204
TCONS_00008040 lncRNA downstream 1182819 29961114 ~ 29961901 (-) True XLOC_004198
TCONS_00008036 lncRNA downstream 1223718 29918315 ~ 29921002 (-) False XLOC_004197
TCONS_00008027 lncRNA downstream 1382709 29760108 ~ 29762011 (-) True XLOC_004194
TCONS_00008025 lncRNA downstream 1407473 29734578 ~ 29737247 (-) True XLOC_004193
TCONS_00008812 lncRNA upstream 53411 31200219 ~ 31202839 (-) True XLOC_004211
TCONS_00008813 lncRNA upstream 58117 31204925 ~ 31211308 (-) True XLOC_004212
TCONS_00008814 lncRNA upstream 1003410 32150218 ~ 32157526 (-) False XLOC_004216
TCONS_00008815 lncRNA upstream 1008146 32154954 ~ 32156318 (-) True XLOC_004216
TCONS_00008816 lncRNA upstream 1219104 32365912 ~ 32391388 (-) True XLOC_004217
TCONS_00008064 mRNA downstream 105187 31038409 ~ 31039533 (-) True XLOC_004208
TCONS_00008063 mRNA downstream 508557 30630905 ~ 30636163 (-) True XLOC_004207
TCONS_00008061 mRNA downstream 510434 30626768 ~ 30634286 (-) False XLOC_004207
TCONS_00008062 mRNA downstream 514092 30628793 ~ 30630628 (-) False XLOC_004207
TCONS_00008060 mRNA downstream 532554 30536545 ~ 30612166 (-) True XLOC_004206
TCONS_00008066 mRNA upstream 21889 31168697 ~ 31172276 (-) False XLOC_004210
TCONS_00008068 mRNA upstream 72148 31218956 ~ 31234584 (-) False XLOC_004213
TCONS_00008069 mRNA upstream 73818 31220626 ~ 31226578 (-) True XLOC_004213
TCONS_00008070 mRNA upstream 111308 31258116 ~ 31276080 (-) False XLOC_004214
TCONS_00008071 mRNA upstream 125841 31272649 ~ 31276064 (-) True XLOC_004214
TCONS_00008056 other downstream 635929 30424226 ~ 30508791 (-) True XLOC_004205
TCONS_00008052 other downstream 779896 30358109 ~ 30364824 (-) False XLOC_004204
TCONS_00008048 other downstream 988885 30153818 ~ 30155835 (-) True XLOC_004201
TCONS_00008043 other downstream 1043463 30101142 ~ 30101257 (-) True XLOC_004200
TCONS_00008039 other downstream 1198080 29944930 ~ 29946640 (-) True XLOC_004197
TCONS_00008067 other upstream 23541 31170349 ~ 31172254 (-) True XLOC_004210
TCONS_00008075 other upstream 1584357 32731165 ~ 32737593 (-) True XLOC_004221
TCONS_00008078 other upstream 2224443 33371251 ~ 33371367 (-) True XLOC_004227
TCONS_00008088 other upstream 2819350 33966158 ~ 33966272 (-) True XLOC_004234
TCONS_00008102 other upstream 3208736 34355544 ~ 34355662 (-) True XLOC_004245