Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU397218 |
| length | 213 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G335460 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 20060024 ~ 20061159 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU397159 | lncRNA | downstream | 157688 | 19879892 ~ 19902336 (-) | True | G335404 |
| TU397160 | lncRNA | downstream | 167561 | 19889080 ~ 19892463 (-) | False | cnksr2a |
| TU396961 | lncRNA | downstream | 270966 | 19788583 ~ 19789058 (-) | True | G335232 |
| TU396959 | lncRNA | downstream | 286967 | 19772853 ~ 19773057 (-) | True | G335230 |
| TU396860 | lncRNA | downstream | 495562 | 19560978 ~ 19564462 (-) | True | G335150 |
| TU397267 | lncRNA | upstream | 60357 | 20121516 ~ 20194381 (-) | False | G335498 |
| TU397272 | lncRNA | upstream | 77016 | 20138175 ~ 20191786 (-) | False | G335498 |
| TU397270 | lncRNA | upstream | 97963 | 20159122 ~ 20191786 (-) | True | G335498 |
| XR_003404154.2 | lncRNA | upstream | 106158 | 20167317 ~ 20172924 (-) | True | LOC113541188 |
| TU397629 | lncRNA | upstream | 499014 | 20560173 ~ 20564445 (-) | False | stag1b |
| XM_026937998.2 | mRNA | downstream | 12855 | 20026736 ~ 20047169 (-) | False | klhl24b |
| XM_026937997.2 | mRNA | downstream | 12855 | 20026736 ~ 20047169 (-) | True | klhl24b |
| XM_034298101.1 | mRNA | downstream | 14238 | 20026736 ~ 20045786 (-) | False | klhl24b |
| XM_034298100.1 | mRNA | downstream | 14238 | 20026736 ~ 20045786 (-) | False | klhl24b |
| XM_034298102.1 | mRNA | downstream | 14469 | 20026736 ~ 20045555 (-) | False | klhl24b |
| XM_026938000.2 | mRNA | upstream | 173627 | 20234786 ~ 20240380 (-) | True | and1 |
| XM_026938022.2 | mRNA | upstream | 181329 | 20242488 ~ 20246311 (-) | True | cops9 |
| XM_026938017.2 | mRNA | upstream | 185292 | 20246451 ~ 20248460 (-) | True | otos |
| XM_034298193.1 | mRNA | upstream | 188298 | 20249457 ~ 20252001 (-) | True | apodb |
| XM_034297872.1 | mRNA | upstream | 220452 | 20281611 ~ 20293054 (-) | True | lrrc31 |
| TU396884 | other | downstream | 456331 | 19600727 ~ 19603693 (-) | True | G335165 |
| TU396861 | other | downstream | 481104 | 19576108 ~ 19578920 (-) | False | nup58 |
| TU395862 | other | downstream | 1539819 | 18444658 ~ 18520205 (-) | False | mybl1 |
| TU395863 | other | downstream | 1617029 | 18442355 ~ 18442995 (-) | False | mybl1 |
| trnay-gua_4 | other | downstream | 1680290 | 18379649 ~ 18379734 (-) | True | trnay-gua_4 |
| TU397303 | other | upstream | 118253 | 20179412 ~ 20182412 (-) | True | G335523 |
| TU397559 | other | upstream | 181361 | 20242520 ~ 20246278 (-) | False | cops9 |
| TU397560 | other | upstream | 185407 | 20246566 ~ 20248461 (-) | False | otos |
| TU397621 | other | upstream | 469463 | 20530622 ~ 20557948 (-) | False | fndc3bb |
| TU397639 | other | upstream | 549073 | 20610232 ~ 20612309 (-) | True | G335788 |
