Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU397368 |
| length | 554 |
| RNA type | TUCP |
| GC content | 0.47 |
| exon number | 5 |
| gene id | lrrc34 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 20274120 ~ 20281252 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU397355 | lncRNA | upstream | 4295 | 20269555 ~ 20269825 (+) | False | mynn |
| TU397353 | lncRNA | upstream | 13313 | 20260571 ~ 20260807 (+) | True | G335558 |
| TU397137 | lncRNA | upstream | 65503 | 20207524 ~ 20208617 (+) | True | G335383 |
| TU397130 | lncRNA | upstream | 82331 | 20091823 ~ 20191789 (+) | True | G335379 |
| TU397129 | lncRNA | upstream | 82486 | 20091823 ~ 20191634 (+) | False | G335379 |
| TU397361 | lncRNA | downstream | 10390 | 20286081 ~ 20371855 (+) | True | G335563 |
| TU397381 | lncRNA | downstream | 24895 | 20300586 ~ 20300899 (+) | True | G335582 |
| TU397363 | lncRNA | downstream | 88726 | 20364417 ~ 20366758 (+) | True | G335564 |
| TU397360 | lncRNA | downstream | 93431 | 20369122 ~ 20371056 (+) | False | G335563 |
| TU397392 | lncRNA | downstream | 102716 | 20378407 ~ 20380717 (+) | True | G335593 |
| XM_026937994.2 | mRNA | upstream | 3555 | 20261868 ~ 20270565 (+) | True | mynn |
| XM_026938013.2 | mRNA | upstream | 14190 | 20254383 ~ 20259930 (+) | False | LOC113541175 |
| XM_026938011.2 | mRNA | upstream | 14190 | 20254764 ~ 20259930 (+) | False | LOC113541175 |
| XM_026938010.2 | mRNA | upstream | 14191 | 20254383 ~ 20259929 (+) | True | LOC113541175 |
| XM_026938005.2 | mRNA | upstream | 45180 | 20216094 ~ 20228940 (+) | False | tmtopsb |
| XM_026938059.2 | mRNA | downstream | 42037 | 20317728 ~ 20333594 (+) | True | si:ch211-230g15.5 |
| XM_026938063.2 | mRNA | downstream | 42037 | 20317728 ~ 20333594 (+) | False | si:ch211-230g15.5 |
| XM_026938062.2 | mRNA | downstream | 42037 | 20317728 ~ 20333594 (+) | False | si:ch211-230g15.5 |
| XM_026938060.2 | mRNA | downstream | 42195 | 20317886 ~ 20333594 (+) | False | si:ch211-230g15.5 |
| XM_026938276.2 | mRNA | downstream | 58921 | 20334612 ~ 20339784 (+) | True | cldn11b |
| TU397154 | other | upstream | 111014 | 20160400 ~ 20163106 (+) | False | ccl20b |
| TU396960 | other | upstream | 485062 | 19788583 ~ 19789058 (+) | True | G335231 |
| TU396585 | other | upstream | 590250 | 19678481 ~ 19683870 (+) | True | si:ch73-264p11.1 |
| TU396584 | other | upstream | 590250 | 19679997 ~ 19683870 (+) | False | si:ch73-264p11.1 |
| TU396524 | other | upstream | 697047 | 19576111 ~ 19577073 (+) | True | G334838 |
| XR_003402672.2 | other | downstream | 469058 | 20744749 ~ 20764373 (+) | True | vipr2 |
| XR_003402673.2 | other | downstream | 469058 | 20744749 ~ 20764373 (+) | False | vipr2 |
