Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026938017.2 |
| length | 716 |
| RNA type | mRNA |
| GC content | 0.37 |
| exon number | 4 |
| gene id | otos |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 20246451 ~ 20248461 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0007605 | sensory perception of sound | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU397267 | lncRNA | downstream | 52070 | 20121516 ~ 20194381 (-) | False | G335498 |
| TU397272 | lncRNA | downstream | 54665 | 20138175 ~ 20191786 (-) | False | G335498 |
| TU397270 | lncRNA | downstream | 54665 | 20159122 ~ 20191786 (-) | True | G335498 |
| XR_003404154.2 | lncRNA | downstream | 73527 | 20167317 ~ 20172924 (-) | True | LOC113541188 |
| TU397218 | lncRNA | downstream | 185292 | 20060024 ~ 20061159 (-) | True | G335460 |
| TU397629 | lncRNA | upstream | 311713 | 20560173 ~ 20564445 (-) | False | stag1b |
| TU397652 | lncRNA | upstream | 412168 | 20660628 ~ 20661829 (-) | True | G335800 |
| TU397687 | lncRNA | upstream | 496099 | 20744559 ~ 20745016 (-) | True | G335831 |
| TU397718 | lncRNA | upstream | 674447 | 20922907 ~ 21002111 (-) | True | G335859 |
| TU397730 | lncRNA | upstream | 768486 | 21016946 ~ 21018572 (-) | True | G335868 |
| XM_026938022.2 | mRNA | downstream | 140 | 20242488 ~ 20246311 (-) | True | cops9 |
| XM_026938000.2 | mRNA | downstream | 6071 | 20234786 ~ 20240380 (-) | True | and1 |
| XM_026937997.2 | mRNA | downstream | 199282 | 20026736 ~ 20047169 (-) | True | klhl24b |
| XM_034298193.1 | mRNA | upstream | 997 | 20249457 ~ 20252001 (-) | True | apodb |
| XM_034297872.1 | mRNA | upstream | 33151 | 20281611 ~ 20293054 (-) | True | lrrc31 |
| XM_034297873.1 | mRNA | upstream | 33151 | 20281611 ~ 20293053 (-) | False | lrrc31 |
| XM_034298170.1 | mRNA | upstream | 47483 | 20295943 ~ 20309042 (-) | True | skilb |
| XM_026938273.2 | mRNA | upstream | 92429 | 20340889 ~ 20356019 (-) | True | slc7a14b |
| TU397559 | other | downstream | 173 | 20242520 ~ 20246278 (-) | False | cops9 |
| TU397303 | other | downstream | 64039 | 20179412 ~ 20182412 (-) | True | G335523 |
| TU396884 | other | downstream | 642758 | 19600727 ~ 19603693 (-) | True | G335165 |
| TU396861 | other | downstream | 667531 | 19576108 ~ 19578920 (-) | False | nup58 |
| TU395862 | other | downstream | 1726246 | 18444658 ~ 18520205 (-) | False | mybl1 |
| TU397621 | other | upstream | 282162 | 20530622 ~ 20557948 (-) | False | fndc3bb |
| TU397639 | other | upstream | 361772 | 20610232 ~ 20612309 (-) | True | G335788 |
