Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU397629 |
| length | 740 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 2 |
| gene id | stag1b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 20560090 ~ 20591616 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU397267 | lncRNA | downstream | 365792 | 20121516 ~ 20194381 (-) | False | G335498 |
| TU397272 | lncRNA | downstream | 368387 | 20138175 ~ 20191786 (-) | False | G335498 |
| TU397270 | lncRNA | downstream | 368387 | 20159122 ~ 20191786 (-) | True | G335498 |
| XR_003404154.2 | lncRNA | downstream | 387249 | 20167317 ~ 20172924 (-) | True | LOC113541188 |
| TU397218 | lncRNA | downstream | 499014 | 20060024 ~ 20061159 (-) | True | G335460 |
| TU397652 | lncRNA | upstream | 96183 | 20660628 ~ 20661829 (-) | True | G335800 |
| TU397687 | lncRNA | upstream | 180114 | 20744559 ~ 20745016 (-) | True | G335831 |
| TU397718 | lncRNA | upstream | 358462 | 20922907 ~ 21002111 (-) | True | G335859 |
| TU397730 | lncRNA | upstream | 452501 | 21016946 ~ 21018572 (-) | True | G335868 |
| TU397727 | lncRNA | upstream | 458512 | 21022957 ~ 21024079 (-) | True | G335865 |
| XM_034298257.1 | mRNA | downstream | 2214 | 20497088 ~ 20557959 (-) | True | fndc3bb |
| XM_026938053.2 | mRNA | downstream | 72029 | 20445239 ~ 20488144 (-) | False | pld1b |
| XM_026938055.2 | mRNA | downstream | 72029 | 20446578 ~ 20488144 (-) | False | pld1b |
| XM_026938054.2 | mRNA | downstream | 79278 | 20445239 ~ 20480895 (-) | True | pld1b |
| XM_034297871.1 | mRNA | downstream | 122342 | 20376679 ~ 20437831 (-) | False | tnikb |
| XM_026912065.2 | mRNA | upstream | 162088 | 20726533 ~ 20740879 (-) | False | zmynd11 |
| XM_026912063.2 | mRNA | upstream | 162088 | 20726533 ~ 20740879 (-) | False | zmynd11 |
| XM_026912062.2 | mRNA | upstream | 162088 | 20726533 ~ 20740878 (-) | False | zmynd11 |
| XM_026912061.2 | mRNA | upstream | 162088 | 20726533 ~ 20740878 (-) | True | zmynd11 |
| XM_034297845.1 | mRNA | upstream | 447053 | 21011498 ~ 21013434 (-) | True | LOC117595766 |
| TU397621 | other | downstream | 2225 | 20530622 ~ 20557948 (-) | False | fndc3bb |
| TU397560 | other | downstream | 311712 | 20246566 ~ 20248461 (-) | False | otos |
| TU397559 | other | downstream | 313895 | 20242520 ~ 20246278 (-) | False | cops9 |
| TU397303 | other | downstream | 377761 | 20179412 ~ 20182412 (-) | True | G335523 |
| TU396884 | other | downstream | 956480 | 19600727 ~ 19603693 (-) | True | G335165 |
| TU397639 | other | upstream | 45787 | 20610232 ~ 20612309 (-) | True | G335788 |
