Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU397652 |
| length | 303 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G335800 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 20660628 ~ 20661829 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU397629 | lncRNA | downstream | 96183 | 20560173 ~ 20564445 (-) | False | stag1b |
| TU397267 | lncRNA | downstream | 466247 | 20121516 ~ 20194381 (-) | False | G335498 |
| TU397272 | lncRNA | downstream | 468842 | 20138175 ~ 20191786 (-) | False | G335498 |
| TU397270 | lncRNA | downstream | 468842 | 20159122 ~ 20191786 (-) | True | G335498 |
| XR_003404154.2 | lncRNA | downstream | 487704 | 20167317 ~ 20172924 (-) | True | LOC113541188 |
| TU397687 | lncRNA | upstream | 82730 | 20744559 ~ 20745016 (-) | True | G335831 |
| TU397718 | lncRNA | upstream | 261078 | 20922907 ~ 21002111 (-) | True | G335859 |
| TU397730 | lncRNA | upstream | 355117 | 21016946 ~ 21018572 (-) | True | G335868 |
| TU397727 | lncRNA | upstream | 361128 | 21022957 ~ 21024079 (-) | True | G335865 |
| TU397729 | lncRNA | upstream | 362512 | 21024341 ~ 21024574 (-) | True | G335867 |
| XM_034298046.1 | mRNA | downstream | 69012 | 20560090 ~ 20591616 (-) | False | stag1b |
| XM_034298044.1 | mRNA | downstream | 69012 | 20560090 ~ 20591616 (-) | False | stag1b |
| XM_034298045.1 | mRNA | downstream | 69012 | 20560090 ~ 20591616 (-) | False | stag1b |
| XM_034298043.1 | mRNA | downstream | 69013 | 20560090 ~ 20591615 (-) | True | stag1b |
| XM_034298257.1 | mRNA | downstream | 102669 | 20497088 ~ 20557959 (-) | True | fndc3bb |
| XM_026912065.2 | mRNA | upstream | 64704 | 20726533 ~ 20740879 (-) | False | zmynd11 |
| XM_026912063.2 | mRNA | upstream | 64704 | 20726533 ~ 20740879 (-) | False | zmynd11 |
| XM_026912062.2 | mRNA | upstream | 64704 | 20726533 ~ 20740878 (-) | False | zmynd11 |
| XM_026912061.2 | mRNA | upstream | 64704 | 20726533 ~ 20740878 (-) | True | zmynd11 |
| XM_034297845.1 | mRNA | upstream | 349669 | 21011498 ~ 21013434 (-) | True | LOC117595766 |
| TU397639 | other | downstream | 48319 | 20610232 ~ 20612309 (-) | True | G335788 |
| TU397621 | other | downstream | 102680 | 20530622 ~ 20557948 (-) | False | fndc3bb |
| TU397560 | other | downstream | 412167 | 20246566 ~ 20248461 (-) | False | otos |
| TU397559 | other | downstream | 414350 | 20242520 ~ 20246278 (-) | False | cops9 |
| TU397303 | other | downstream | 478216 | 20179412 ~ 20182412 (-) | True | G335523 |
