Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026924034.2 |
| length | 1205 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 11 |
| gene id | LOC113532599 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 8308408 ~ 8322160 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU389718 | lncRNA | downstream | 93154 | 8212756 ~ 8215254 (-) | True | G328942 |
| TU389677 | lncRNA | downstream | 174521 | 8133683 ~ 8133887 (-) | True | G328908 |
| TU389620 | lncRNA | downstream | 262811 | 8044983 ~ 8045597 (-) | True | G328864 |
| TU389535 | lncRNA | downstream | 404521 | 7903642 ~ 7903887 (-) | True | G328798 |
| XR_003403393.2 | lncRNA | downstream | 509023 | 7797200 ~ 7799385 (-) | True | LOC113533080 |
| TU389830 | lncRNA | upstream | 11678 | 8333831 ~ 8334176 (-) | True | G329039 |
| TU389840 | lncRNA | upstream | 29079 | 8351232 ~ 8351641 (-) | True | G329049 |
| XR_004576942.1 | lncRNA | upstream | 250991 | 8573144 ~ 8576124 (-) | True | LOC117595772 |
| TU390020 | lncRNA | upstream | 297074 | 8619227 ~ 8626449 (-) | True | G329211 |
| TU390107 | lncRNA | upstream | 428689 | 8750842 ~ 8751044 (-) | True | G329290 |
| XM_026924518.2 | mRNA | downstream | 23688 | 8273940 ~ 8284720 (-) | False | fzd6 |
| XM_026924517.2 | mRNA | downstream | 23688 | 8273940 ~ 8284720 (-) | True | fzd6 |
| XM_034298112.1 | mRNA | downstream | 24097 | 8273940 ~ 8284311 (-) | False | fzd6 |
| XM_026924478.2 | mRNA | downstream | 44348 | 8252752 ~ 8264060 (-) | False | pigm |
| XM_034298119.1 | mRNA | downstream | 44348 | 8252752 ~ 8264060 (-) | True | pigm |
| XM_026924820.2 | mRNA | upstream | 267111 | 8589264 ~ 8646509 (-) | True | rpgrip1 |
| XM_026924162.2 | mRNA | upstream | 330279 | 8652432 ~ 8665855 (-) | True | cavin1b |
| XM_026924128.2 | mRNA | upstream | 508694 | 8830847 ~ 8836831 (-) | True | si:dkey-197c15.6 |
| XM_034298134.1 | mRNA | upstream | 622232 | 8944385 ~ 8955194 (-) | True | txndc5 |
| XM_026923926.2 | mRNA | upstream | 640619 | 8962772 ~ 8967175 (-) | True | bloc1s5 |
| TU389089 | other | downstream | 922102 | 7378780 ~ 7386306 (-) | False | sec61b |
| TU388974 | other | downstream | 1245980 | 7056794 ~ 7062428 (-) | True | G328342 |
| trnam-cau_47 | other | downstream | 1878476 | 6429860 ~ 6429932 (-) | True | trnam-cau_47 |
| XR_003403372.2 | other | downstream | 2330029 | 5829474 ~ 5978379 (-) | False | zfpm2a |
| XR_003404173.1 | other | upstream | 1962681 | 10284834 ~ 10284937 (-) | True | LOC113541360 |
| TU391129 | other | upstream | 2200579 | 10522732 ~ 10523263 (-) | True | G330185 |
| XR_003404157.2 | other | upstream | 2600973 | 10923126 ~ 10930775 (-) | False | ackr4b |
| TU391338 | other | upstream | 2760115 | 11082268 ~ 11083151 (-) | True | G330379 |
| TU392350 | other | upstream | 4354428 | 12676581 ~ 12677933 (-) | False | LOC113541288 |
