Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026937910.2 |
| length | 1119 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 6 |
| gene id | cd226 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047616.1 |
| NCBI id | CM018562.1 |
| chromosome length | 21037487 |
| location | 14297560 ~ 14309471 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004576995.1 | lncRNA | upstream | 335376 | 13958024 ~ 13962184 (+) | True | LOC117595809 |
| TU392599 | lncRNA | upstream | 914924 | 13380644 ~ 13382636 (+) | True | G331502 |
| TU392593 | lncRNA | upstream | 934858 | 13361369 ~ 13362702 (+) | True | G331496 |
| TU392595 | lncRNA | upstream | 936542 | 13360280 ~ 13361018 (+) | True | G331498 |
| TU392561 | lncRNA | upstream | 1007161 | 13287447 ~ 13290399 (+) | True | G331468 |
| TU393268 | lncRNA | downstream | 378692 | 14688163 ~ 14703270 (+) | True | G332111 |
| TU393426 | lncRNA | downstream | 635520 | 14944991 ~ 14945212 (+) | True | G332238 |
| TU393440 | lncRNA | downstream | 646389 | 14955860 ~ 14956067 (+) | True | G332248 |
| TU393531 | lncRNA | downstream | 756504 | 15065975 ~ 15113514 (+) | True | G332334 |
| TU393529 | lncRNA | downstream | 802192 | 15111663 ~ 15112523 (+) | False | G332334 |
| XM_034298235.1 | mRNA | upstream | 1789 | 14234044 ~ 14295771 (+) | True | rttn |
| XM_034298236.1 | mRNA | upstream | 1964 | 14234044 ~ 14295596 (+) | False | rttn |
| XM_034298306.1 | mRNA | upstream | 317371 | 13975240 ~ 13980189 (+) | True | cbln2b |
| XM_026937939.2 | mRNA | upstream | 849812 | 13406164 ~ 13447748 (+) | True | mtrr |
| XM_026937943.2 | mRNA | upstream | 901099 | 13386074 ~ 13396461 (+) | True | cmbl |
| XM_026937862.2 | mRNA | downstream | 77490 | 14386961 ~ 14405762 (+) | True | crispld1a |
| XM_026938139.2 | mRNA | downstream | 177499 | 14486970 ~ 14517787 (+) | True | jph1a |
| XM_026937861.2 | mRNA | downstream | 220193 | 14529664 ~ 14535320 (+) | True | LOC113541072 |
| XM_026937931.2 | mRNA | downstream | 234520 | 14543991 ~ 14564674 (+) | True | zfhx2 |
| XM_026937930.2 | mRNA | downstream | 234520 | 14543991 ~ 14564674 (+) | False | zfhx2 |
| trnat-agu_17 | other | upstream | 912286 | 13385201 ~ 13385274 (+) | True | trnat-agu_17 |
| TU392569 | other | upstream | 1039144 | 13257894 ~ 13258416 (+) | True | G331476 |
| TU392341 | other | upstream | 1584882 | 12706939 ~ 12712678 (+) | True | G331263 |
| XR_003404147.2 | other | upstream | 2140773 | 12062332 ~ 12156787 (+) | True | prkag2a |
| TU391847 | other | upstream | 2549001 | 11738158 ~ 11748559 (+) | True | ankha |
| XR_004576981.1 | other | downstream | 942164 | 15251635 ~ 15264587 (+) | False | si:ch73-173p19.2 |
| TU393912 | other | downstream | 1256704 | 15566175 ~ 15566663 (+) | True | G332636 |
| TU394735 | other | downstream | 2798001 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394736 | other | downstream | 2798001 | 17107472 ~ 17110027 (+) | False | hhatlb |
| TU394798 | other | downstream | 2975611 | 17285082 ~ 17300011 (+) | True | G333388 |
