RNA id: XM_034298150.1


Basic Information

Item Value
RNA id XM_034298150.1
length 2477
RNA type mRNA
GC content 0.50
exon number 8
gene id drd3
representative True

Chromosome Information

Item Value
chromosome id NC_047616.1
NCBI id CM018562.1
chromosome length 21037487
location 17336192 ~ 17353309 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome
species striped catfish
(Pangasianodon hypophthalmus)

Sequence

tggAGAGCGAGGACCATCACTCACTTCTCATGTCCAATGCTGCTTTAAGGACTTCTGCGCTGATGGACAAATCTCAGATCCATCTTTTGCACTTTGTTGAAAGAAGATCTGGTGCAGGATGTTCTCCAGCGTGAAAAGCGCTCGGCTCGTGCACACGGGAACAGCTGGAAAAGGCGCGCGCTCTCAGGAGCCGCACGGAGATGCGTCCGCACGGCACGTGCTCGCAAACAACTCCTGGATTTTAGTGAAATAAATGGATGACAGAAAGCGCAGTGGGGGTCTTTCAAATCCTCTGTGCAGCACTGTGCATTGATGCCAAGCTCTATAtgctctctgtcctgaagaagacAGGGGGGGAATGGAGAAGAGGACAGGCGAAGTGTCGGGAGAAGTTTGAGCGCACAGGAGCAGGTGCTTTCCCGAGCTGAACGAGCAGCACAGGTTTTACTATCCATGGCAATGTTACACAGCAGTGAATGGTGGTGGAATGACTCTGAGCGATCTGCAAATGCGATGCCGAACTCCAGCCTGGGTCCAGCTGTGGAGGATGTGGTGCGCAACTACTACGCCATGCTCTATTCGCTACTTATCCTGGCGATTGTATTCGGGAATGTGCTAGTTTGTTTGGCAGTGGTCAGAGAGAAGTCGCTTCAAACCACGACCAATTATCTTGTGGTTAGTCTGGCTGTGGCTGATCTGCTGGTGGCTTCGCTGGTCATGCCTTGGGCTGTCTATTTAGAGGTGGTTGGTGGCTCTTGGCTCTTTAGCCGTTTGtactgcaatatttttgtgACGTTGGACGTGATGATGTGTACAGCCAGCATCCTCAACCTGTGCGCCATCAGCATCGACAGGTACACAGCCGTGGTGATGCCTGTACTGTACAACACAACTGACAGTTCACGTAAAAGAGTGTCAGTCATGATAGCCACAGTGTGGATCCTGGCCTTCGCTGTCTCCTGCCCTTTACTGTTTGGCTTCAACACCACAGaCGATCCACTGGTGTGCTCCATATCGAACCCTGATTTTGTCATCTACTCATCTGTAGTATCGTTCTACCTTCCCTTCGTGGTGACGTTGCTGGTTTACGTGCGCATCTACATCTTcctcaggaggaggaggaagaggataaCGTTCCGGCAAGCCAGCAGTGAAGCTCCACCAGGATCTACACTGCCAACTGCAGAGACCTGTTTGCAAGAGGACACTCGAAAAGATAGACGTGACCTGTCTCCCATCAGGATCAATGtggtaaatGAGAGCACAGAGAAGGTGGTTCGTCCCCGGCTGCTCCCAGGCTGCCTACGGCGTAAACGACCCAAGACCGTCCCCGTTGATAACTCTCTCCTTCCCCCGGCGGACACGCCGAACTACTGCAGCATTAGCCAGGCCTCCTTCGCACGTACAGAACCCGAGCCCAACCGCGAGGAAGAGGCAgggcaagaagaagaagagcaggCGACTGTGAGGAGTAGTGAGGTGAAGGAGATGTCTAATGGACGTGCTCTCACCACAGTTCGGCCTGCTCGAGTCTCACGATGCAACAACCAGAGCCGCTACAGGAACCGACAGTCCAGAGAGAAGAAAGCCACACAGATGCTGGCTATTGTACTGGGGGTCTTTCTCATCTGCTGGTTGCCCTTCTTTGTGACTCACATCTTGAACACTCACTGCAGGAAGTGTCATGTGCCACCCGAGCTGTACAGCGCCTTTACCTGGCTCGGCTACGTCAACAGCGCCCTCAATCCGGTCATTTACACCACCTTCAACATCGAGTTTCGAAGAGCCTTCATCAAAATCCTGACCTGCTGATCTTGACTTTGCAATTCTTCAAACTTTTCTGCTCTAGGATTGAGTGCCAAAATGTCAAAGAACTTTGAAAGCTGGTCGTAGACTGGCCATGTTCGAAATCACTTCATGCTTCCAACAAAGAGCCCCAGTGAACTGGACATTTAAGAGGCCACAGGATTCAGTAATGAAACGAGGGAATAGAGTGCTAGGCTTCTTGATTCTAGGATGATTGAACTGAAGACTATCAAGGGAAAAGTGATTTGGATCATGTAAACAACACTCAAGAATGCAATTGGCATCCGTTGGACTAAAAGCGTGTGGATTACATATCACTTGAGGACCTGATCTGCGTAATATGACCTAAAAGTGGTTTGGGTTGCATATCAGGAGATCTCAAGGGCTCAATCAGCATCCGAGCCTGTACAAATCATGGACGTAACCAGACTTTGTTCTGTTCCTTACACACTTAAAGAAGCTGTTTTTCCAGTTTCTGGTCTGGTGCTTcatctgtatttgcatgtgtctCTAAGAGTCTGTCTCTGCCCTTTTGGGTGGAAATGTTCAGAAAGCATCCATCCAGTGTTTGAGGAAGTGAAGTATTATTAAGTCTAGTACACGTCTGGGACTAGCTTCTTTAAATGGGATGCTTTGAGGTCTGAGTGGCACCTAAGACTTATGAAAACCAT

Function

GO:

id name namespace
GO:0007195 adenylate cyclase-inhibiting dopamine receptor signaling pathway biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0004952 dopamine neurotransmitter receptor activity molecular_function

KEGG:

id description
K04146 DRD3; dopamine receptor D3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU394762 lncRNA upstream 149517 17186129 ~ 17186675 (+) True G333360
TU394629 lncRNA upstream 438337 16893006 ~ 16897855 (+) True G333244
XR_003404172.2 lncRNA upstream 446031 16888937 ~ 16890161 (+) True LOC113541357
TU394631 lncRNA upstream 446463 16888906 ~ 16889729 (+) False LOC113541357
TU394612 lncRNA upstream 506213 16772003 ~ 16829979 (+) True G333232
TU395018 lncRNA downstream 9562 17362871 ~ 17363075 (+) True G333548
TU395063 lncRNA downstream 92876 17446185 ~ 17447043 (+) True G333582
TU395113 lncRNA downstream 187328 17540637 ~ 17541761 (+) False rnf6
TU395303 lncRNA downstream 314327 17667636 ~ 17667844 (+) True G333787
TU395307 lncRNA downstream 317107 17670416 ~ 17670625 (+) True G333791
XM_026938246.2 mRNA upstream 2683 17329834 ~ 17333509 (+) True si:ch211-161h7.8
XM_026937860.2 mRNA upstream 20492 17310721 ~ 17315700 (+) True fam162a
XM_026938186.2 mRNA upstream 36802 17296573 ~ 17299390 (+) True LOC113541297
XM_034298096.1 mRNA upstream 45297 17287140 ~ 17290895 (+) True LOC117595788
XM_026938185.2 mRNA upstream 49456 17285104 ~ 17286736 (+) True LOC113541296
XM_026938210.2 mRNA downstream 24992 17378301 ~ 17390639 (+) True ccdc191
XM_034298218.1 mRNA downstream 24992 17378301 ~ 17390639 (+) False ccdc191
XM_026938140.2 mRNA downstream 78737 17432046 ~ 17434825 (+) True urad
XM_026938141.2 mRNA downstream 79475 17432784 ~ 17434825 (+) False urad
XM_026937820.2 mRNA downstream 97414 17450723 ~ 17466452 (+) False lnx2a
TU394792 other upstream 34188 17287160 ~ 17302004 (+) False G333388
TU394795 other upstream 34495 17292031 ~ 17301697 (+) False G333388
TU394798 other upstream 36181 17285082 ~ 17300011 (+) True G333388
TU394801 other upstream 36181 17287160 ~ 17300011 (+) False G333388
TU394797 other upstream 41138 17287160 ~ 17295054 (+) False G333388
TU395491 other downstream 633453 17986762 ~ 17993014 (+) True G333943
XR_004576961.1 other downstream 962047 18315356 ~ 18323295 (+) False mtfr1
XR_004576962.1 other downstream 962049 18315358 ~ 18323295 (+) False mtfr1
XR_004576959.1 other downstream 962051 18315360 ~ 18323295 (+) False mtfr1
XR_004576960.1 other downstream 962374 18315683 ~ 18323295 (+) True mtfr1

Expression Profile